Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_015274.1 Length=56506 Score E Sequences producing significant alignments: (Bits) Value seq25735 89.7 2e-13 >seq25735 Length=42053 Score = 89.7 bits (98), Expect = 2e-13 Identities = 162/237 (68%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 301 CCTTTGCCCTAAAACAGGACAGCCTGACTTCGCGAATGTTTTCATTAGTTACATTCCAAA 360 ||||||||||| || || || || || || || | | ||| ||||| | || | Sbjct 18625 CCTTTGCCCTATTACTGGTCAACCCGATTTTGCTGAAATACGCATCAGTTATGTGCCCGA 18684 Query 361 CGAAAAGATGGTTGAATCTAAATCATTGAAATTGTACTTATTCAGTTTCCGTAACCACGG 420 || ||||| || |||| ||||| | ||| |||| || || | || ||||| Sbjct 18685 TATTAAAATGGTGGAGAGTAAAAGCTTGAAGCTTTACCTATTTAGCTTTAGAAATCACGG 18744 Query 421 TGACTTCCACGAAGATTGCATGAACATTATTTTGAATGACTTGTATGAATTGATGGAACC 480 | || ||||||||||| | || || || |||| ||| || | || ||||||| || Sbjct 18745 CGCTTTTCACGAAGATTGTGTAAATATCATCATGAAAGACCTGATTAAACTGATGGATCC 18804 Query 481 TAAGTACATTGAAGTCATGGGCCTATTCACTCCTCGTGGTGGAATTTCAATTTACCC 537 ||||||||||| | || | |||||||| ||||||||||| || || ||||| Sbjct 18805 ACGATACATTGAAGTTACTGGTATTTTCACTCCACGTGGTGGAATATCTATCTACCC 18861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180498531326752