Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq22040 150 2e-31
>seq22040
Length=22008
Score = 150 bits (166), Expect = 2e-31
Identities = 179/240 (75%), Gaps = 2/240 (1%)
Strand=Plus/Minus
Query 154875 ATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAG 154934
|||||||| || ||||||||||||||| | ||||| || || || | |||| |||||
Sbjct 18173 ATGATTACTTATCCATCTACACATGGTATTTTTGAGACCAATATACGCGAGATGTGTAAC 18114
Query 154935 ATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTA 154994
| | || || ||| | || || || | ||||| |||||| | ||||| || |||
Sbjct 18113 TTAATACACGAAGCTGGAGCACAAGTGTACATGGATGGTGCAAATATGAATGCCCAAGTA 18054
Query 154995 GGACTAGCAAAACCATGTGAGTAT-GGTGCAGATGTATGTCATCTAAACTTACATAAAAC 155053
||||| |||| || || ||| || ||||| |||||||| || ||| ||||||| ||
Sbjct 18053 GGACTTACAAATCC-TGGCTTTATCGGAGCAGACGTATGTCACCTTAACCTACATAAGAC 17995
Query 155054 ATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCAAAACA 155113
|| |||||| ||||| ||||| || ||||| ||||||||||| | |||||||||||
Sbjct 17994 CTTTGCTATTCCTCATGGTGGTGGTGGCCCTGGTGTAGGTCCTATTTGCGTAGCAAAACA 17935
Score = 113 bits (124), Expect = 5e-20
Identities = 164/228 (72%), Gaps = 3/228 (1%)
Strand=Plus/Minus
Query 153207 ATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCAT-ACAGCGAAACGTTCTTGA 153265
|| |||||||| | |||||||| ||||| || |||| || ||| ||||| || | |
Sbjct 19877 ATTGGTCAAGGTTGGTATGGAACAATTACTCCGGCAGTTATTACA-CGAAATGTATTCCA 19819
Query 153266 GAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATT 153325
|||||| |||||| || || |||||||| ||||||| || |||| || || || |
Sbjct 19818 AAATCCTGTTTGGTATACGTCATACACTCCGTATCAAGGAGAAGTATCGCAAGGTAGGCT 19759
Query 153326 GGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAA 153385
|| || ||| | |||| ||||||| || | || | |||||| | ||| || | ||
Sbjct 19758 CGAGGCCTTAATGAATTTCCAAACGGCTATTTCTGATTTAACAGGACTTCCACTATCCAA 19699
Query 153386 CGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG-CTAT 153432
| || || ||||||||||||| || | |||||| || ||| ||||
Sbjct 19698 CTGTTCATTACTAGATGAAGCAACAGCTGGAGCAGAGGCTATGACTAT 19651
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578541115876480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |