Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq22040 165 1e-35 >seq22040 Length=22008 Score = 165 bits (182), Expect = 1e-35 Identities = 182/240 (76%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 159550 ATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAG 159609 |||||||| |||||||||||||||||| | ||||| || || || | |||| ||||| Sbjct 18173 ATGATTACTTATCCATCTACACATGGTATTTTTGAGACCAATATACGCGAGATGTGTAAC 18114 Query 159610 ATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTA 159669 | | || || ||| | || || || | |||||||||||| | ||||| || ||| Sbjct 18113 TTAATACACGAAGCTGGAGCACAAGTGTACATGGATGGTGCAAATATGAATGCCCAAGTA 18054 Query 159670 GGTCTAGCAAAACCATGTGACTAT-GGTGCAGATGTATGTCATCTAAACTTACATAAGAC 159728 || || |||| || || ||| || ||||| |||||||| || ||| |||||||||| Sbjct 18053 GGACTTACAAATCC-TGGCTTTATCGGAGCAGACGTATGTCACCTTAACCTACATAAGAC 17995 Query 159729 ATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACA 159788 || |||||| ||||| ||||| || ||||| |||||||||||| | ||||||||||| Sbjct 17994 CTTTGCTATTCCTCATGGTGGTGGTGGCCCTGGTGTAGGTCCTATTTGCGTAGCAAAACA 17935 Score = 107 bits (118), Expect = 2e-18 Identities = 159/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 157882 ATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCAT-ACAGCGAAACGTTCTTGA 157940 || |||||||| | |||||||| || || || |||| || ||| ||||| || | | Sbjct 19877 ATTGGTCAAGGTTGGTATGGAACAATTACTCCGGCAGTTATTACA-CGAAATGTATTCCA 19819 Query 157941 GAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATT 158000 |||||| |||||| || || |||||||| ||||||| || |||| || || || | Sbjct 19818 AAATCCTGTTTGGTATACGTCATACACTCCGTATCAAGGAGAAGTATCGCAAGGTAGGCT 19759 Query 158001 GGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAA 158060 || || ||| | |||| ||||||| || | || | |||||||| || || | || Sbjct 19758 CGAGGCCTTAATGAATTTCCAAACGGCTATTTCTGATTTAACAGGACTTCCACTATCCAA 19699 Query 158061 CGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 | || || ||||||||||||| || | |||||| || ||| Sbjct 19698 CTGTTCATTACTAGATGAAGCAACAGCTGGAGCAGAGGCTATG 19656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587369266425920