Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq22040 165 1e-35
>seq22040
Length=22008
Score = 165 bits (182), Expect = 1e-35
Identities = 182/240 (76%), Gaps = 2/240 (1%)
Strand=Plus/Minus
Query 159550 ATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAG 159609
|||||||| |||||||||||||||||| | ||||| || || || | |||| |||||
Sbjct 18173 ATGATTACTTATCCATCTACACATGGTATTTTTGAGACCAATATACGCGAGATGTGTAAC 18114
Query 159610 ATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTA 159669
| | || || ||| | || || || | |||||||||||| | ||||| || |||
Sbjct 18113 TTAATACACGAAGCTGGAGCACAAGTGTACATGGATGGTGCAAATATGAATGCCCAAGTA 18054
Query 159670 GGTCTAGCAAAACCATGTGACTAT-GGTGCAGATGTATGTCATCTAAACTTACATAAGAC 159728
|| || |||| || || ||| || ||||| |||||||| || ||| ||||||||||
Sbjct 18053 GGACTTACAAATCC-TGGCTTTATCGGAGCAGACGTATGTCACCTTAACCTACATAAGAC 17995
Query 159729 ATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACA 159788
|| |||||| ||||| ||||| || ||||| |||||||||||| | |||||||||||
Sbjct 17994 CTTTGCTATTCCTCATGGTGGTGGTGGCCCTGGTGTAGGTCCTATTTGCGTAGCAAAACA 17935
Score = 107 bits (118), Expect = 2e-18
Identities = 159/223 (71%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 157882 ATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCAT-ACAGCGAAACGTTCTTGA 157940
|| |||||||| | |||||||| || || || |||| || ||| ||||| || | |
Sbjct 19877 ATTGGTCAAGGTTGGTATGGAACAATTACTCCGGCAGTTATTACA-CGAAATGTATTCCA 19819
Query 157941 GAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATT 158000
|||||| |||||| || || |||||||| ||||||| || |||| || || || |
Sbjct 19818 AAATCCTGTTTGGTATACGTCATACACTCCGTATCAAGGAGAAGTATCGCAAGGTAGGCT 19759
Query 158001 GGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAA 158060
|| || ||| | |||| ||||||| || | || | |||||||| || || | ||
Sbjct 19758 CGAGGCCTTAATGAATTTCCAAACGGCTATTTCTGATTTAACAGGACTTCCACTATCCAA 19699
Query 158061 CGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103
| || || ||||||||||||| || | |||||| || |||
Sbjct 19698 CTGTTCATTACTAGATGAAGCAACAGCTGGAGCAGAGGCTATG 19656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 587369266425920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |