Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq7134 147 5e-30
seq4400 129 1e-24
seq11308 109 1e-18
>seq7134
Length=91468
Score = 147 bits (162), Expect = 5e-30
Identities = 169/226 (75%), Gaps = 6/226 (3%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| | || || ||||| || ||||||||||| || || ||||| || | |||||
Sbjct 86524 TCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGT 86465
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| || ||||| ||||| || || || ||||| | | || |||||||| || |||||
Sbjct 86464 GCGGCCGTCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCC 86405
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTC 195095
||||| ||||| || || |||||||||||| |||||||| ||| ||||| ||
Sbjct 86404 CTCTTTTTCTTGGATCTTCCCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTC 86348
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
||||| | ||||| || ||||| ||||||||||| | ||||||
Sbjct 86347 CAGGGTGATGGTCTTACCGGTCAACGTTTTTACGAAGATCTGCATT 86302
Score = 132 bits (146), Expect = 1e-25
Identities = 165/225 (73%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| | || || ||||| || ||||||||||| || || ||||| || | |||||
Sbjct 87208 TCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGT 87149
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| || ||||| ||||| || || || ||||| | | || |||||||| || |||||
Sbjct 87148 GCGGCCGTCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCC 87089
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
|| |||||||| || || |||||| ||||| |||||||| ||| ||||| ||
Sbjct 87088 CTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTC 87032
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | ||||| || ||||| || || ||||| | |||||
Sbjct 87031 CAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 86987
Score = 123 bits (136), Expect = 6e-23
Identities = 148/200 (74%), Gaps = 6/200 (3%)
Strand=Plus/Minus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003
||||||||||| || || ||||| || | ||||| | |||||||| |||||||| ||
Sbjct 87411 GTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGTCCATCTTCCAGCTGCTTCCCG 87352
Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063
|| ||||| || | || |||||||| || ||||| || || || || || || ||||
Sbjct 87351 GCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCATGGATCTTGGCCTTG 87292
Query 195064 ACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAA 195120
|| ||||| |||||||| ||| ||||| || ||||| | ||||| || |||||
Sbjct 87291 ACATTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAAG 87235
Query 195121 GTTTTTACGAACACTTGCAT 195140
|| || ||||| | |||||
Sbjct 87234 GTCTTCACGAAGATCTGCAT 87215
>seq4400
Length=129001
Score = 129 bits (142), Expect = 1e-24
Identities = 155/211 (73%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || || |||||||| || || |||||||||| ||||| | ||||| ||
Sbjct 40105 ACGAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATCCTCC 40046
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| || | || ||||| ||||| ||||||||||| || ||
Sbjct 40045 AGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTATCCTGG 39986
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| |||||||| ||||| || ||||| || ||||| | |||||
Sbjct 39985 ATCTTGGCCTTCACGTTCTCGATGGTATCGCTGGGCTCCACCTCCAGGGTGATGGTCTTG 39926
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
|| || | || || ||||| | |||||||
Sbjct 39925 CCGGTGAGGGTCTTCACGAAGATCTGCATTT 39895
Score = 129 bits (142), Expect = 1e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || || |||||||| || || |||||||||| ||||| | ||||| ||
Sbjct 40561 ACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATCCTCC 40502
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| || | || ||||||||||| ||||||||||| || ||
Sbjct 40501 AGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCTGGAGGGATGCCTTCTTTATCCTGG 40442
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| |||||||| ||||| || ||||| || ||||| | |||||
Sbjct 40441 ATCTTGGCCTTCACGTTCTCGATGGTATCGCTGGGCTCCACCTCCAGGGTGATGGTCTTG 40382
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || ||||| | |||||
Sbjct 40381 CCGGTGAGGGTCTTCACGAAGATCTGCAT 40353
Score = 125 bits (138), Expect = 2e-23
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || || |||||||| || || |||||||||| ||||| | ||||| ||
Sbjct 40333 ACGAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATCCTCC 40274
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| || | || ||||| ||||| ||||||||||| || ||
Sbjct 40273 AGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTATCCTGG 40214
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| |||||||| ||||| || ||||| || ||||| | |||||
Sbjct 40213 ATCTTGGCCTTCACGTTCTCGATGGTATCGCTGGGCTCCACCTCCAGGGTGATGGTCTTG 40154
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || ||||| | |||||
Sbjct 40153 CCGGTGAGGGTCTTCACGAAGATCTGCAT 40125
>seq11308
Length=60846
Score = 109 bits (120), Expect = 1e-18
Identities = 100/125 (80%), Gaps = 1/125 (1%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|| ||||||||| |||| |||||||||||||| |||||||| ||||| |||| || |||
Sbjct 52894 TCAGAGTCTCAATGCAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCGG-AAAAGT 52836
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
|||| ||| |||||||| || || ||||| |||| ||| || || |||||||| ||
Sbjct 52835 ATGTCCATTTTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCC 52776
Query 195039 TTCTT 195043
|| ||
Sbjct 52775 TTTTT 52771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1108162824404124
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