Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_016160.1
Length=36661
Score E
Sequences producing significant alignments: (Bits) Value
seq42976 127 5e-25
seq83063 118 2e-22
seq62219 80.6 6e-11
>seq42976
Length=315
Score = 127 bits (140), Expect = 5e-25
Identities = 195/278 (70%), Gaps = 0/278 (0%)
Strand=Plus/Plus
Query 14604 GCGCTTGGGGAAGGGGAGTTTGCTGGACAGCTCACCGGGAAGGATATCTACCTGGACGGA 14663
|| || ||||||||||| ||||| || |||| |||||||| |||||| ||||||||
Sbjct 30 GCCCTCGGGGAAGGGGAATTTGCCGGGGAGCTGACCGGGAAAAATATCTTTCTGGACGGT 89
Query 14664 ACAGCGCTGGAGAATGCTGACGGCTCCCAAAACTTCAGCGGGGTAACGTGGGAGTTTCGC 14723
||| |||| |||||||||||| || ||||||| ||||| |||||| | ||
Sbjct 90 ACACCGCTACTGAATGCTGACGGATCAGAAAACTTTCCTGGGGTGGTGTGGGAATACCGT 149
Query 14724 GCGGGAACGCAGGCGCAAAAATATATTCAGGGTATTCCCGGTACCGAAAACGAGATCAGC 14783
| ||||| |||||||||| || |||||||| || || | | || || || || | |
Sbjct 150 CCCGGAACTCAGGCGCAAATCTACATTCAGGGGATGCCGGCGGCGGAGAATGAAATTACC 209
Query 14784 GTAGGAACTGAGGTATCAAGTGCCACAGCCTGGACGCGCACGTTTACCAATACGCAGCTT 14843
|| || || || || ||| | ||| ||| | || |||||| |||||||
Sbjct 210 GTTGGTACCACTGTGCAGAGCAGCACGCCGTGGGCGCATGCATTCACCAATCCGCAGCTG 269
Query 14844 TCAGCAGTTCGCCTGCGTCTTAAATGGCCCTCGCTTTT 14881
|| || | ||| | || || |||||||| || || ||
Sbjct 270 TCCGCTATCCGCGTCCGCCTGAAATGGCCGTCCCTGTT 307
>seq83063
Length=222
Score = 118 bits (130), Expect = 2e-22
Identities = 139/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 12832 CATGCTGCAGCTGAATATCCTCGTGAGTGTTGCGGCGTGGTGGCGCAAAAGAGCCGGGTA 12891
||||| | | ||||||||| |||||||| ||||| ||| | |||||||| ||| ||
Sbjct 35 CATGCAGAACGTGAATATCCCCGTGAGTGCTGCGGGGTGATCGCGCAAAAATCCCGTGTG 94
Query 12892 GAGAAATATTTTCCATGTAGTAACCTCGCTACCGAGCCGACAGAACATTTTCACCTGTCG 12951
| ||||||||| || ||| | || |||| ||| ||||||||| | | |||
Sbjct 95 GTGAAATATTTCCCCTGTCGCAATATCGCGGTTTCTCCGGAGGAACATTTTGTCTTATCG 154
Query 12952 CCAGAAGACTATGCAGCTGCTGAGGACTGGGGTACGGTGATCGCCATCGTTCACAGTCAC 13011
|| ||||| || || ||||| || || ||||| |||||||||| || |||||||||||
Sbjct 155 CCGGAAGATTACGCCGCTGCGGATGATTGGGGAACGGTGATCGGTATTGTTCACAGTCAT 214
Query 13012 CCTGACGC 13019
|| || ||
Sbjct 215 CCGGATGC 222
>seq62219
Length=352
Score = 80.6 bits (88), Expect = 6e-11
Identities = 103/142 (73%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 26730 GTTTTCCCGTATACAAACACATAAATGCCATCGCCATCAAAACAGGTTATGGATACATCA 26789
|||| ||||| ||||| ||||| | |||||||||||||| | ||||| ||||||
Sbjct 259 GTTTGTCCGTAGACAAAAACATATACACCATCGCCATCAAAGTAATTTATGTGGACATCA 200
Query 26790 ACAAAGATCTCATCTCCCGGATTGATGGTTCCCTCCATGCTGTCACCGCGAACCGTGATG 26849
| ||| | | || || ||||| || || || | ||| || |||||| ||| |||||
Sbjct 199 ATAAAAACTTGGTCACCAGGATTAATTGTACCTTGCATACTATCACCGGCAACAGTGATC 140
Query 26850 ACTTTTACGCTTTCCTGTGGCC 26871
| ||||| | |||| |||||
Sbjct 139 ATTTTTATGTTTTCACTTGGCC 118
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 117064491619672
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |