Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq41845 120 1e-22 >seq41845 Length=897 Score = 120 bits (132), Expect = 1e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 23841 GCGCCTGGAGGAGATCGACCAGATGGACCTCCTGGACATTGTCAATGATGACCTGACCCT 23900 |||||||| || || ||||||||||| | || |||||| | | |||||| ||| | | Sbjct 389 GCGCCTGGTTGAAATAGACCAGATGGATGTTCTCGACATTATGACCGATGACATGAGCAT 330 Query 23901 GCGCCCGCTCAGCCAGTGGCCCAAGGCCTGGCGCCAGTACCTCAGCGGCTTCGACCTGGC 23960 | ||| || | | ||||| | ||||| | ||||| |||||||||||||| || Sbjct 329 AAGGCCGGTCTCCGACTGGCCTGCATCATGGCGGCGCTACCTGAGCGGCTTCGACCTTGC 270 Query 23961 CGAGATGTTCGAGGGCAAGGGCGACTCCCGCGCGGCGGTCGGCATCCTCAAGAAGATCAA 24020 || ||||| || || || || || | | |||||||||| ||||| || || Sbjct 269 TGATATGTTTGAAGGACGTGGTGAAAATCGGGAAATGATCGGCATCCTGAAGAAAATAAA 210 Query 24021 ATGGCCGGACAAGGTGAAGAACCTGGAACTGCTCGG 24056 |||||| |||||||| |||||||| ||| ||||||| Sbjct 209 ATGGCCTGACAAGGTCAAGAACCTTGAATTGCTCGG 174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156937316578408