Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq25394 123 6e-23 >seq25394 Length=23467 Score = 123 bits (136), Expect = 6e-23 Identities = 190/264 (72%), Gaps = 9/264 (3%) Strand=Plus/Minus Query 150527 GCTGGTACTAAGTATCGTGGTGAATTCGAAGAACGTGTAGACAATTTGCTA-CAA-GAAC 150584 |||||||| || || ||||| | || ||||| || || |||| | || ||| |||| Sbjct 11906 GCTGGTACAAAATACCGTGGCCAGTTTGAAGAGCGAATA--CAATCTATTATCAACGAAC 11849 Query 150585 TAAAAGAACGCGATGATGTTATTCTGTTCATCGATGAAATCCATACTATTATGGGTGCTG 150644 |||| || | |||||| ||| | |||||||| ||||| ||||| | | ||||| | Sbjct 11848 TAAACAAAAACCCTGATGTAATTATATTCATCGACGAAATTCATACACTAGTTGGTGCAG 11789 Query 150645 GTGCGACTGGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAACCTGCTCTATCTCGCG 150704 || | ||| || ||| ||||| | |||||| |||||||||||||| | || | Sbjct 11788 GTTCTGCTGCTGG---TTCAATGGATGCGGCCAATATTTTAAAACCTGCTCTGGCACGAG 11732 Query 150705 GTGAAATTCG-TGTCATCGGTGCAACAACCTACGATGAATATCGTAAACACATTGAAAAA 150763 | || || | ||| || ||||||||||| | || || |||||||| || |||||| Sbjct 11731 GAGAGATCCAATGT-ATTGGTGCAACAACATTAGACGAGTATCGTAATAGTATAGAAAAA 11673 Query 150764 GATGCAGCACTACAGCGTCGTTTC 150787 |||| ||| || ||||||||||| Sbjct 11672 GATGGAGCTTTAGAGCGTCGTTTC 11649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1146226326712456