Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_019490.1
Length=49329
Score E
Sequences producing significant alignments: (Bits) Value
seq27612 235 2e-57
seq7440 82.4 2e-11
>seq27612
Length=11165
Score = 235 bits (260), Expect = 2e-57
Identities = 432/634 (68%), Gaps = 22/634 (3%)
Strand=Plus/Minus
Query 25200 AATTGTTCCGACAAGTTCTCTATGTTGTCTAAATAGGTCGTGTGGATATGTAGGACATCG 25259
|| ||||| || | ||| || |||| || || |||||||| || || || | ||||
Sbjct 2705 AACTGTTCTGAAAGGTTTTCCTTGTTATCCAAGTAGGTCGTATGAATGTGCAAAACATTA 2646
Query 25260 GGGTGGGTGCTTATCTGCACATCTACACCGTCAATCTGTACTATCTTGTGGGTGTTTTCA 25319
|| || || || || || | ||||||||| |||| ||| | |||||| || |||||
Sbjct 2645 GGATGAGTCGAGATTTGAACCTGTACACCGTCTATCTCTACAAGCTTGTGAGTTTTTTCT 2586
Query 25320 ATGTATTTTTTATAAATAAAATGGTCGGAGTCGGTAGGGTTGAGTATCAGTATAACTCTT 25379
| ||||| |||||||||||||| | ||||| |||||||| | || | |||| |
Sbjct 2585 AAATATTTCTTATAAATAAAATGATTAGAGTCAGTAGGGTTCATGATAATGATAATCCGA 2526
Query 25380 AACTGTTTATTTTTCTGACGAATGGATAGGATTAACTTTTCGTAATCTTCCTCGCTTTCC 25439
|||| | || ||||| || || || |||| ||| |||||||| || || || |
Sbjct 2525 TTCTGTATTCCCTTTTGACGGATAGAAAGCATTAGCTTGTCGTAATCATCTTCACTAGTC 2466
Query 25440 CACTCTTCCATTTCATCGCCCACGAAGGTGGTTATCCCTTGTATGGATTTAAGGTTTGCC 25499
||||| || |||||| | |||||||| || ||||| ||||| || || | |||||
Sbjct 2465 CACTCCTCTGCTTCATCACAAACGAAGGTCGTAATCCCATGTATTGACTTTAACTTTGCT 2406
Query 25500 GTTTGGTTTCCTGACGAAGTTTTTATCCCTCTAAATAAAACACTACTTCCTGAAAATTTA 25559
|| || |||||||| || ||||| || || | ||| | || | |||||| | | ||||
Sbjct 2405 GTCTGATTTCCTGAAGAGGTTTTAATACCACGAAACATAATAGCACTTCCAGTCATTTTA 2346
Query 25560 TTTAGTATTTCATTGTTTGTTACTGTAAAATA--TTCCTGCACGCCCTCTTTTTCTATTT 25617
|| | || || | || || |||| || |||| | || ||| |||| ||
Sbjct 2345 TTGACTACATCTGTCTTAGTAGTCTTAAAGTACTTTCC--CGTTCCATCTAACTCTACTT 2288
Query 25618 TCTCCTCAAACTCTGGAATGATAGAAATACGAGCGGAGGTCATCGTGTAACGGCTAAAGA 25677
| || | ||||| ||||| | ||| || ||| || |||| || |||||| || |||
Sbjct 2287 TTTCATAGAACTCAGGAATAACAGATATTGAAGCTGAAATCATTGTATAACGGGTATAGA 2228
Query 25678 GTATCTTATGCCC---------------AG---CTTCAAAAGATAATCGCTCTACAAAGG 25719
|||| || || | || |||||||| ||| | ||||| ||| |
Sbjct 2227 GTATTTTGTGGACTAACTTCTCTATGGGAGTCATTTCAAAAGTTAACCTCTCTATAAATG 2168
Query 25720 TAGTCGCATTGTAGGATTTTGCAGACCCTCTACCTCCTGTAAGGAGTATAATAAACTTGT 25779
|| ||||| | || || | || || | ||||||||||| || || |||||||| |
Sbjct 2167 CAGCTGCATTAAAAGACTTGCCCGAACCACGACCTCCTGTAATAAGAATTATAAACTTCT 2108
Query 25780 CTTTGTTGGTGTAAAGTGGGTTATATACTTCTTG 25813
|||||| | |||||||||| ||||| |||||
Sbjct 2107 CTTTGTCCCTATAAAGTGGGTAATATATCTCTTG 2074
>seq7440
Length=141321
Score = 82.4 bits (90), Expect = 2e-11
Identities = 122/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 29085 GTACCCCACGCTTCTCTAATGCTACCGTCTACCTTTTGAAAGTAGAAACGAACAATACCC 29144
||||| | |||||||| | |||| ||||||||||| |||||||| || ||||||
Sbjct 18976 GTACCGTAGGCTTCTCTTAGAGTACCATCTACCTTTTGGAAGTAGAACTTTACGATACCC 19035
Query 29145 TGTTGCATTCTCTTTTTTAGTTTGTAATTTGCCCACGCtttttttAGGCATTCGCTAAAT 29204
| || ||| | ||| |||||| | |||||||| || ||||||| ||| || | |
Sbjct 19036 TTTTTCATAGCTTCTTTGAGTTTGAAGTTTGCCCAAGCCTTTTTTAAAGCTTCACTCATT 19095
Query 29205 TTTAAACCTGTTTGTTTGAAAAACTGCCACGCTAATTGCATTATTTGTTTTAA 29257
| ||||| | |||| | || ||||| || | | ||| || ||| ||||
Sbjct 19096 GTAAAACCATTGCGTTTTACGAATTGCCAAGCGAGTGTCATAATCTGTCTTAA 19148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 157557432663224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |