Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq62545 168 1e-36
seq20608 123 5e-23
seq2491 98.7 2e-15
seq2665 86.0 1e-11
>seq62545
Length=348
Score = 168 bits (186), Expect = 1e-36
Identities = 183/243 (75%), Gaps = 0/243 (0%)
Strand=Plus/Minus
Query 241385 AGCTGCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGG 241444
||| |||| ||||| | || | ||| || ||||| |||||| || |||||||||||
Sbjct 256 AGCAGCTGGCAGCCATTGCTGACGTGGGTCATGACCTTCTGTTTTAGCTGGGCCACCTGC 197
Query 241445 TCCCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACT 241504
||||| || | || || | ||||| || || || |||| |||||| ||||||
Sbjct 196 TCCCGGAGGAGCCCGGCAGTGCTCGACAGCCCCGCATTCTCAGCCTTGAGTGTCTTCACC 137
Query 241505 TTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAG 241564
|| |||||||| ||||||||||||||||| || ||| ||||| |||||||| ||||
Sbjct 136 TTGTCCTCCAGGCGCGCGATGCGTTCCAGCTTCCGCTTCCGGCACTTGGTGGCAGCCAGT 77
Query 241565 CGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGA 241624
|| ||||| || | ||| || ||| | |||||||| |||||||| ||||| | ||| ||
Sbjct 76 CGATTCCGCAGCCGCTTGCGCTCCACTTTGATGCGCTCCTGGTCTTCCATATTGATGGGG 17
Query 241625 GAC 241627
|||
Sbjct 16 GAC 14
>seq20608
Length=25523
Score = 123 bits (136), Expect = 5e-23
Identities = 359/551 (65%), Gaps = 9/551 (2%)
Strand=Plus/Plus
Query 48020 ACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGC 48079
|| ||||| |||| |||||| ||||||| |||||| || | | | || |
Sbjct 9092 ACTGGCAAGGCCTCTGTGAGGAACTCCTGTTCTATCCTAACAGAATTGATGATGATTTCT 9151
Query 48080 TTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAG 48139
|| || | | ||| | ||||||| ||||||| || | | | | ||||||||||
Sbjct 9152 TTCACTCTCGGCTCCAAAGGTTTGTGCAGCAGGTGTTT---AAACATCGGGCAGGCAAAG 9208
Query 48140 TCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATG 48199
|| | ||| || |||| || | ||| || || | ||||| || ||||||||||| |
Sbjct 9209 TCACAGTGTAAACCTTTATCTCTGCTAATAAGTTCATTGGAAAATGTGAGACCAGGCACG 9268
Query 48200 ACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCC 48259
| || | ||||||||||| |||| || ||||| ||||| |||||||| || |||
Sbjct 9269 AGTCCTTGATTCTTGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCC 9328
Query 48260 ACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAA 48319
|| | || || || | | ||||| | | ||| | |||||| ||||| |
Sbjct 9329 ACCGTAGCAAAGGCTACCACACGTTCTCCACAGGTAGCCTCTTTGTCTCCAATCCAAGGC 9388
Query 48320 AGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTC 48379
| ||||| |||||||||||||| | | |||||| |||| ||||| ||||||
Sbjct 9389 AAAGCCCAATCTGCCTTCTTCTTTACACGAGGCATCATCTCAATGGCATTGAAGAGAAAT 9448
Query 48380 TTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAGAG 48436
|| | || | |||| || || || | |||| || | |||| |||||
Sbjct 9449 TTCCTTTCTTTGGAGTCCTTAATGTAAGTGTCAATGAGGAGACT---AAACATTTCAGAA 9505
Query 48437 TGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACT 48496
| | || || || || || ||||| || ||||| ||| || | ||| |||
Sbjct 9506 CGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGAGGGCTTCTGTAATCTGAACT 9565
Query 48497 TCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAG 48556
||| | || | ||||| || || ||||| ||||| ||||| | ||||||||
Sbjct 9566 TCTTGGCTAAAACACTCCACCAAGTTTTCATTTACTATGCCATCACTTGTTGCAAAGAAA 9625
Query 48557 GCAAGGACATG 48567
|| || |||||
Sbjct 9626 GCCAGAACATG 9636
>seq2491
Length=174120
Score = 98.7 bits (108), Expect = 2e-15
Identities = 99/129 (77%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 241499 TTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCT 241558
|||||||| ||||||||||| ||||| | |||||| || | ||||| |||| |||
Sbjct 91855 TTCACTTTTTCCTCCAGCCGGGCGATCCTTTCCAGCTTTCTTTTCCGGCACTTGGAGGCA 91914
Query 241559 GCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCG 241618
|| | |||||||| | | ||| | |||||||| || || |||||| ||||||||||
Sbjct 91915 GCAATGCGGTTCCTCATGCGCTTCCTCTCCGCCTTAATCCGCTCCTGGGACTCCATGTCG 91974
Query 241619 ATCGGAGAC 241627
|| ||||||
Sbjct 91975 ATGGGAGAC 91983
>seq2665
Length=168205
Score = 86.0 bits (94), Expect = 1e-11
Identities = 95/124 (77%), Gaps = 2/124 (2%)
Strand=Plus/Plus
Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587
|| ||||| | || || |||||||||||||||||| ||| || ||||||||||| |||
Sbjct 87835 GTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCTGCTGG 87894
Query 213588 TTTGACTTTGCGTTGGCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTG 213646
||| || || | || ||||| ||||| |||||||| |||| || |||||| |||
Sbjct 87895 -TTGCTCTTCCGATTACAGGAATCTTTGTAAAGCATGTACGGGGTACCTGTCTCTGTCTG 87953
Query 213647 GGAC 213650
|||
Sbjct 87954 AGAC 87957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 930452547988480
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