Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq20608 105 1e-17
seq1625 86.0 1e-11
>seq20608
Length=25523
Score = 105 bits (116), Expect = 1e-17
Identities = 310/471 (66%), Gaps = 15/471 (3%)
Strand=Plus/Minus
Query 25601 TGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTCACCA 25660
|||| ||||||||| | |||||| ||||| || || || || ||| | || | |
Sbjct 9629 TGGCTTTCTTTGCAACAAGTGATGGCATAGTAAATGAAAACTTGGTGGAGTGTTTTAGCC 9570
Query 25661 GGGAAGTGCAG--TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAAAA 25718
||||| ||| ||| || ||| |||||||| || ||||| || ||||| |||||
Sbjct 9569 AAGAAGTTCAGATTACA--GAAGCCCTCTGTTTCTATGGCTTCCAAATTGCCATGGAAAA 9512
Query 25719 TGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTCGCCGA 25775
| | ||||| ||| | | || || || || ||||||| ||| | ||
Sbjct 9511 CATACGTTCTGAAATGTTT---AGTCTCCTCATTGACACTTACATTAAGGACTCCAAAGA 9455
Query 25776 GAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTG 25835
|| | || || |||||| ||| || || | | |||| |||||| ||
Sbjct 9454 AAGGAAATTTCTCTTCAATGCCATTGAGATGATGCCTCGTGTAAAGAAGAAGGCAGATTG 9395
Query 25836 GGCCATGAAGTGGATCAACAGCCAGAGCG-CTACGTTTGGCGAGCGGCTGGTAGCCTTTG 25894
||| || ||||| || || || | |||| | ||| || || ||||||||||||
Sbjct 9394 GGCTTTGCCTTGGATTGG-AGACAAAGAGGCTACCTGTGGAGAACGTGTGGTAGCCTTTG 9336
Query 25895 CTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGA 25954
|| | ||||| || ||||| || ||||| ||||| | || |||||||||||| |
Sbjct 9335 CTACGGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCAATATTCTGGCTCAAGAATC 9276
Query 25955 AGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCC 26014
| || | |||| || || |||||||| || || || ||||| || | ||| | |
Sbjct 9275 AAGGACTCGTGCCTGGTCTCACATTTTCCAATGAACTTATTAGCAGAGATAAAGGTTTAC 9216
Query 26015 ACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTT 26065
|| | || |||||||||| | | | | ||| |||| ||||||||||
Sbjct 9215 ACTGTGACTTTGCCTGCCCGATGTTTA---AACACCTGCTGCACAAACCTT 9168
>seq1625
Length=211188
Score = 86.0 bits (94), Expect = 1e-11
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 26245 AACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAG 26304
|| ||||| ||||||||||| || || || ||||||||||||| ||||||||||| |||
Sbjct 133131 AATCCGTTTGACTTTATGGAGAATATCTCACTGGAAGGGAAGACTAACTTCTTTGAGAAG 133072
Query 26305 AGGGTCGGCGACTATCA 26321
|| || ||||| |||||
Sbjct 133071 AGAGTAGGCGAGTATCA 133055
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 927767665127680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |