Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_019508.1 Length=38309 Score E Sequences producing significant alignments: (Bits) Value seq57556 80.6 7e-11 >seq57556 Length=433 Score = 80.6 bits (88), Expect = 7e-11 Identities = 125/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 29935 TATTTGCTGATTCAGTAAGCACAAGTAAAACAACTATTTTAGTAAGAGAAATGGCTAAGA 29994 ||||| ||||| |||||| || | || | ||| | |||||||| | || | | Sbjct 339 TATTTACTGATGCAGTAACAGGAACTGAAGATTCAATTCTTATAAGAGAATTAGCAACTA 280 Query 29995 TATTAAAGCAAAATGGAGTTGATACAGGAGAAAAGAAGTTTTATAAGTGGTTAAGAGAAA 30054 ||||||| ||||| |||||||||| ||||||||||| | | || ||| | || |||| Sbjct 279 TATTAAATCAAAAAGGAGTTGATATAGGAGAAAAGAGACTATTCAAATGGATGAGGGAAA 220 Query 30055 ATGGTTATCTAGTTAAAGCTAGTTGTACCGACTATAATATGCCAACTCAAAAATCAATG 30113 |||| ||| || | ||| | ||| || | || | || ||||||||||| ||| Sbjct 219 ATGGGTATTTAATCAAAAGAGATGGTATAGATAAGAACTTACCTACTCAAAAATCCATG 161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122332281865944