Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_019526.1
Length=345809
Score E
Sequences producing significant alignments: (Bits) Value
seq25394 107 4e-18
seq20717 98.7 2e-15
>seq25394
Length=23467
Score = 107 bits (118), Expect = 4e-18
Identities = 202/294 (69%), Gaps = 6/294 (2%)
Strand=Plus/Minus
Query 48481 CTGTAACTGCTGGTACAAAATACCGTGGTGAATTCGAAGAACGTATGGAAGGTATTATTA 48540
||||| |||||||||||||||||||| | || ||||| || || || |||||| |
Sbjct 11914 CTGTAGTAGCTGGTACAAAATACCGTGGCCAGTTTGAAGAGCGAATACAATCTATTATCA 11855
Query 48541 AAGAACTTAAAAAACGAGAAAATGTAATTTTGTTCATTGATGAAGTACATATTATGATGG 48600
| ||||| || ||| |||||||| | ||||| || ||| | |||| | | |
Sbjct 11854 ACGAACTAAACAAAAACCCTGATGTAATTATATTCATCGACGAAATTCATACACTAGTTG 11795
Query 48601 GTGCTGGTGGTAGCAGCACTGGATCTATGGATATGAGCAATATCATGAAACCTGCACTTT 48660
|||| ||| | || | |||| || |||||| | |||||| | |||||||| ||
Sbjct 11794 GTGCAGGTTCT-GCTG--CTGGTTCAATGGATGCGGCCAATATTTTAAAACCTGCTCTGG 11738
Query 48661 CACGTGGTGATATTCGTGTTATCGGTGCAACAACTTATGAGGAATATCGCCAGAACATTG 48720
|||| || || || | ||| ||||||||||| | || || ||||| | | || |
Sbjct 11737 CACGAGGAGAGATCCAATGTATTGGTGCAACAACATTAGACGAGTATCGTAATAGTATAG 11678
Query 48721 AAAAAGATGCTGCATTTTCCCGCCGCTTCACTAAAATTGATGTAGTTGAACCTA 48774
||||||||| || || || || ||| ||||| | |||| |||||||
Sbjct 11677 AAAAAGATGGAGCTTTAGAGCGTCGTTTCCAGAAAAT---TCTAGTAGAACCTA 11627
>seq20717
Length=30955
Score = 98.7 bits (108), Expect = 2e-15
Identities = 132/181 (73%), Gaps = 6/181 (3%)
Strand=Plus/Plus
Query 321595 GGTCAACATTTAAATGTAAATGTATTATCACGTTCTCAATTAGAAGAAGCACAGAAATTT 321654
||||||||||||||||| ||||| || ||| || ||| ||||| ||| | |
Sbjct 13494 GGTCAACATTTAAATGTTAATGTGTTTGATCGTAGTCTATTGGAAGATGCAATGGAGCAC 13553
Query 321655 CCTGAAAAATATCCTCAACTTACTATTCGTGTTTCTGGATATGCAGT--TCGTT-TTAAT 321711
|||||||||||||| || | ||||||||||||||||||||||| || | || | ||
Sbjct 13554 CCTGAAAAATATCCACAGTTAACTATTCGTGTTTCTGGATATGCTGTGAACTTTGTGAAG 13613
Query 321712 TCTCTTACGAAAGAACAACAAAATGATGTAATTTCACGAACTTTCACTACTAAGTTCTAA 321771
| | || | |||||||||| || |||||| |||| | || ||||| ||||||
Sbjct 13614 T---TAACTAGAGAACAACAATTAGACGTAATTAATAGAACAATTACAACTAAATTCTAA 13670
Query 321772 T 321772
|
Sbjct 13671 T 13671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1105142418855264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |