Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_019559.1 Length=202946 Score E Sequences producing significant alignments: (Bits) Value seq8864 93.3 5e-14 >seq8864 Length=76667 Score = 93.3 bits (102), Expect = 5e-14 Identities = 179/264 (68%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 153745 CCCGCGTCCCTCAGATGCTCGTTGAAAACTACACAAGAACCTTTAATTGTAACGTGGCAA 153804 |||| ||| | ||||||| || ||| | | || ||| | ||||| |||||||| Sbjct 28040 CCCGTTTCCTTACGATGCTCTCTGCAAAGTCCCCACGAAGTCCTGATTGTGACGTGGCAG 28099 Query 153805 AAGAAGAAAGCTGTAGGTCCAGAAAATATGGCCACGTATAGCAAAGCCCACGGTGTAGTG 153864 || | | ||||| | || ||||| |||| ||| | ||||| ||| || || ||| Sbjct 28100 AAAATCAGGGCTGTGAGCCCGGAAAACATGGTCACCTTCAGCAAGAACCATGGGGTTGTG 28159 Query 153865 CTTCAGCCCACATATAAAGATAGAATTAATATAACCGAATTAGGTCTTTTAAACAGTAGT 153924 || ||||| | ||| | || | | || || ||||| | || || ||| | Sbjct 28160 CTCCAGCCTGCCTATGAGGACAAGGTGAACATCACCGAGCTGGGACTCCATAACTCAACC 28219 Query 153925 ATAACGTTTTGGAATGCAACACTGGATGATGAAGGCTGTTATATGTGTCTGTTTAATATG 153984 || || || |||||| | || ||||||||||| || ||||| | ||| || || |||| Sbjct 28220 ATTACCTTCTGGAATACCACCCTGGATGATGAGGGGTGTTACAAGTGCCTCTTCAATACC 28279 Query 153985 TTCGGTTCTGGTAAGGTATCGGGA 154008 || |||||||| ||| | || ||| Sbjct 28280 TTTGGTTCTGGGAAGATCTCAGGA 28303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 648546240182720