Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_019705.1 Length=38759 Score E Sequences producing significant alignments: (Bits) Value seq42976 136 1e-27 seq83063 96.9 9e-16 >seq42976 Length=315 Score = 136 bits (150), Expect = 1e-27 Identities = 213/305 (70%), Gaps = 0/305 (0%) Strand=Plus/Plus Query 13808 TCTGTAGCGAAGGCAAAAATCCTCGTTGCGCTTGGGGAAGGTGAGTTTGCAGGGCAGCTC 13867 || || || || || ||| | || | || || |||||||| || ||||| ||| |||| Sbjct 3 TCCGTTGCCAAAGCGAAATTGCTGATCGCCCTCGGGGAAGGGGAATTTGCCGGGGAGCTG 62 Query 13868 ACCGGCAAAGATATCTACCTGGACGGAACAGCGCTGGAGAATGCTGACGGCTCCCAAAAC 13927 ||||| ||| |||||| |||||||| ||| |||| |||||||||||| || ||||| Sbjct 63 ACCGGGAAAAATATCTTTCTGGACGGTACACCGCTACTGAATGCTGACGGATCAGAAAAC 122 Query 13928 TTCAGCGGGGTAACGTGGGAGTTTCGCGCGGGAACTCAGGCGCAAAAATATATTCAGGGT 13987 || ||||| |||||| | || | |||||||||||||||| || |||||||| Sbjct 123 TTTCCTGGGGTGGTGTGGGAATACCGTCCCGGAACTCAGGCGCAAATCTACATTCAGGGG 182 Query 13988 ATTCCCGGTACCGAAAACGAGATCAGCGTAGGAACTGAGGTATCAAGTGCCACAGCCTGG 14047 || || | | || || || || | ||| || || || || ||| | ||| Sbjct 183 ATGCCGGCGGCGGAGAATGAAATTACCGTTGGTACCACTGTGCAGAGCAGCACGCCGTGG 242 Query 14048 ACGCGCACGTTTACCAATACGCAGCTTTCAGCAGTTCGCCTGCGTCTTAAATGGCCCTCG 14107 ||| | || |||||| ||||||| || || | ||| | || || |||||||| || Sbjct 243 GCGCATGCATTCACCAATCCGCAGCTGTCCGCTATCCGCGTCCGCCTGAAATGGCCGTCC 302 Query 14108 Ctttt 14112 || || Sbjct 303 CTGTT 307 >seq83063 Length=222 Score = 96.9 bits (106), Expect = 9e-16 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 11986 GAATACCCGCGAGAGTGCTGCGGCGTGGTGGCGCAGAAAAGCCGGGTTGAGCGTTATTTC 12045 ||||| || || ||||||||||| ||| | ||||| ||| ||| || | | |||||| Sbjct 47 GAATATCCCCGTGAGTGCTGCGGGGTGATCGCGCAAAAATCCCGTGTGGTGAAATATTTC 106 Query 12046 CCCTGCCGCAACCTTTCTGAAGAGCCGACAGAACATTTTCACCTTTCTCCCGAAGACTAC 12105 ||||| ||||| | | | ||| ||||||||| | | || || ||||| ||| Sbjct 107 CCCTGTCGCAATATCGCGGTTTCTCCGGAGGAACATTTTGTCTTATCGCCGGAAGATTAC 166 Query 12106 GCAGCTGCCGAAGACTGGGGGACGGTGGTAGCCATTGTTCACAGCCACCCTGACGC 12161 || ||||| || || ||||| |||||| | | ||||||||||| || || || || Sbjct 167 GCCGCTGCGGATGATTGGGGAACGGTGATCGGTATTGTTCACAGTCATCCGGATGC 222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123770695464744