Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_019709.1
Length=41567
Score E
Sequences producing significant alignments: (Bits) Value
seq83063 141 2e-29
seq42976 136 1e-27
seq85032 93.3 1e-14
>seq83063
Length=222
Score = 141 bits (156), Expect = 2e-29
Identities = 140/179 (78%), Gaps = 4/179 (2%)
Strand=Plus/Plus
Query 12794 TGAATATCCTCGTGAGTGCTGCGGTGTGGTGGCGCAAAAAAGCCGTGT--TGAACGTTAT 12851
||||||||| |||||||||||||| ||| | ||||||||| |||||| |||| |||
Sbjct 46 TGAATATCCCCGTGAGTGCTGCGGGGTGATCGCGCAAAAATCCCGTGTGGTGAA--ATAT 103
Query 12852 TTTCCTTGCCGGAATCTTGCCGCTGCGCCGAAGGAAAATTTTGTCCTCTGCCCGGAAGAT 12911
|| || || || ||| | || | | | ||| ||||| |||||||| | | |||||||||
Sbjct 104 TTCCCCTGTCGCAATATCGCGGTTTCTCCGGAGGAACATTTTGTCTTATCGCCGGAAGAT 163
Query 12912 TACGCAGCTGCTGAGGACTGGGGTACGGTGATCGCCATCGTTCACAGCCACCCTGACGC 12970
||||| ||||| || || ||||| |||||||||| || |||||||| || || || ||
Sbjct 164 TACGCCGCTGCGGATGATTGGGGAACGGTGATCGGTATTGTTCACAGTCATCCGGATGC 222
>seq42976
Length=315
Score = 136 bits (150), Expect = 1e-27
Identities = 213/305 (70%), Gaps = 0/305 (0%)
Strand=Plus/Plus
Query 14527 TCTGTAGCGAAGGCAAAAATCCTCGTTGCGCTTGGGGAAGGTGAGTTTGCAGGGCAGCTC 14586
|| || || || || ||| | || | || || |||||||| || ||||| ||| ||||
Sbjct 3 TCCGTTGCCAAAGCGAAATTGCTGATCGCCCTCGGGGAAGGGGAATTTGCCGGGGAGCTG 62
Query 14587 ACCGGCAAAGATATCTACCTGGACGGAACAGCGCTGGAGAATGCTGACGGCTCCCAAAAC 14646
||||| ||| |||||| |||||||| ||| |||| |||||||||||| || |||||
Sbjct 63 ACCGGGAAAAATATCTTTCTGGACGGTACACCGCTACTGAATGCTGACGGATCAGAAAAC 122
Query 14647 TTCAGCGGGGTAACGTGGGAGTTTCGCGCGGGAACTCAGGCGCAAAAATATATTCAGGGT 14706
|| ||||| |||||| | || | |||||||||||||||| || ||||||||
Sbjct 123 TTTCCTGGGGTGGTGTGGGAATACCGTCCCGGAACTCAGGCGCAAATCTACATTCAGGGG 182
Query 14707 ATTCCCGGTACCGAAAACGAGATCAGCGTAGGAACTGAGGTATCAAGTGCCACAGCCTGG 14766
|| || | | || || || || | ||| || || || || ||| | |||
Sbjct 183 ATGCCGGCGGCGGAGAATGAAATTACCGTTGGTACCACTGTGCAGAGCAGCACGCCGTGG 242
Query 14767 ACGCGCACGTTTACCAATACGCAGCTTTCAGCAGTTCGCCTGCGTCTTAAATGGCCCTCG 14826
||| | || |||||| ||||||| || || | ||| | || || |||||||| ||
Sbjct 243 GCGCATGCATTCACCAATCCGCAGCTGTCCGCTATCCGCGTCCGCCTGAAATGGCCGTCC 302
Query 14827 CTTTT 14831
|| ||
Sbjct 303 CTGTT 307
>seq85032
Length=217
Score = 93.3 bits (102), Expect = 1e-14
Identities = 125/174 (72%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 32124 AAAACATATGGATTCAATAAGAAAACAGATCGAATAGCCGATGAGCAAATTTCTCAGTTA 32183
|||||||| || ||| ||||||| || || ||||| ||| || | || | |
Sbjct 196 AAAACATACGGGTTCGGGAAGAAAAATGACCGGATAGCAGATTCTCAGCTGTCAGAAATT 137
Query 32184 ACAGGACTGTCAAGGCAGAATGTTAACAAGGCTAAAAAAGAACTGATTTCAATGAATTGC 32243
|| || ||||| | ||||| ||||||||||| || || ||| | ||||||||||||| |
Sbjct 136 ACCGGCCTGTCCCGTCAGAACGTTAACAAGGCAAAGAACGAATTAATTTCAATGAATTAC 77
Query 32244 CTGTTTATGGATGGAAATCAAATCGGTGTAAACAGGGAGGTATCTGCGTGGCAA 32297
| | | ||||| ||| | || || || |||| |||||| || |||||| ||
Sbjct 76 ATCGTGAAAGATGGCAATAAGATTGGGGTTAACAAGGAGGTTTCGGCGTGGAAA 23
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132746396321256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |