Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_019714.1
Length=39026
Score E
Sequences producing significant alignments: (Bits) Value
seq83063 147 5e-31
seq42976 127 5e-25
>seq83063
Length=222
Score = 147 bits (162), Expect = 5e-31
Identities = 141/179 (79%), Gaps = 4/179 (2%)
Strand=Plus/Plus
Query 12841 TGAATATCCTCGTGAGTGCTGCGGTGTGGTGGCGCAAAAAAGCCGTGT--TGAACGTTAT 12898
||||||||| |||||||||||||| ||| | ||||||||| |||||| |||| |||
Sbjct 46 TGAATATCCCCGTGAGTGCTGCGGGGTGATCGCGCAAAAATCCCGTGTGGTGAA--ATAT 103
Query 12899 TTTCCTTGCCGGAATCTTGCCGCTGCGCCGAAGGAAAATTTTGTCCTCTGCCCGGAAGAT 12958
|| || || || ||| | || | | | ||| ||||| |||||||| | | |||||||||
Sbjct 104 TTCCCCTGTCGCAATATCGCGGTTTCTCCGGAGGAACATTTTGTCTTATCGCCGGAAGAT 163
Query 12959 TACGCAGCTGCTGAGGACTGGGGTACGGTGATCGCCATCGTTCACAGTCACCCTGACGC 13017
||||| ||||| || || ||||| |||||||||| || ||||||||||| || || ||
Sbjct 164 TACGCCGCTGCGGATGATTGGGGAACGGTGATCGGTATTGTTCACAGTCATCCGGATGC 222
>seq42976
Length=315
Score = 127 bits (140), Expect = 5e-25
Identities = 195/278 (70%), Gaps = 0/278 (0%)
Strand=Plus/Plus
Query 14601 GCGCTTGGGGAAGGGGAGTTTGCTGGACAGCTCACCGGGAAGGATATCTACCTGGACGGA 14660
|| || ||||||||||| ||||| || |||| |||||||| |||||| ||||||||
Sbjct 30 GCCCTCGGGGAAGGGGAATTTGCCGGGGAGCTGACCGGGAAAAATATCTTTCTGGACGGT 89
Query 14661 ACAGCGCTGGAGAATGCTGACGGCTCCCAAAACTTCAGCGGGGTAACGTGGGAGTTTCGC 14720
||| |||| |||||||||||| || ||||||| ||||| |||||| | ||
Sbjct 90 ACACCGCTACTGAATGCTGACGGATCAGAAAACTTTCCTGGGGTGGTGTGGGAATACCGT 149
Query 14721 GCGGGAACGCAGGCGCAAAAATATATTCAGGGTATTCCCGGTACCGAAAACGAGATCAGC 14780
| ||||| |||||||||| || |||||||| || || | | || || || || | |
Sbjct 150 CCCGGAACTCAGGCGCAAATCTACATTCAGGGGATGCCGGCGGCGGAGAATGAAATTACC 209
Query 14781 GTAGGAACTGAGGTATCAAGTGCCACAGCCTGGACGCGCACGTTTACCAATACGCAGCTT 14840
|| || || || || ||| | ||| ||| | || |||||| |||||||
Sbjct 210 GTTGGTACCACTGTGCAGAGCAGCACGCCGTGGGCGCATGCATTCACCAATCCGCAGCTG 269
Query 14841 TCAGCAGTTCGCCTGCGTCTTAAATGGCCCTCGCTTTT 14878
|| || | ||| | || || |||||||| || || ||
Sbjct 270 TCCGCTATCCGCGTCCGCCTGAAATGGCCGTCCCTGTT 307
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124624154200032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |