Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_019714.1 Length=39026 Score E Sequences producing significant alignments: (Bits) Value seq83063 147 5e-31 seq42976 127 5e-25 >seq83063 Length=222 Score = 147 bits (162), Expect = 5e-31 Identities = 141/179 (79%), Gaps = 4/179 (2%) Strand=Plus/Plus Query 12841 TGAATATCCTCGTGAGTGCTGCGGTGTGGTGGCGCAAAAAAGCCGTGT--TGAACGTTAT 12898 ||||||||| |||||||||||||| ||| | ||||||||| |||||| |||| ||| Sbjct 46 TGAATATCCCCGTGAGTGCTGCGGGGTGATCGCGCAAAAATCCCGTGTGGTGAA--ATAT 103 Query 12899 TTTCCTTGCCGGAATCTTGCCGCTGCGCCGAAGGAAAATTTTGTCCTCTGCCCGGAAGAT 12958 || || || || ||| | || | | | ||| ||||| |||||||| | | ||||||||| Sbjct 104 TTCCCCTGTCGCAATATCGCGGTTTCTCCGGAGGAACATTTTGTCTTATCGCCGGAAGAT 163 Query 12959 TACGCAGCTGCTGAGGACTGGGGTACGGTGATCGCCATCGTTCACAGTCACCCTGACGC 13017 ||||| ||||| || || ||||| |||||||||| || ||||||||||| || || || Sbjct 164 TACGCCGCTGCGGATGATTGGGGAACGGTGATCGGTATTGTTCACAGTCATCCGGATGC 222 >seq42976 Length=315 Score = 127 bits (140), Expect = 5e-25 Identities = 195/278 (70%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 14601 GCGCTTGGGGAAGGGGAGTTTGCTGGACAGCTCACCGGGAAGGATATCTACCTGGACGGA 14660 || || ||||||||||| ||||| || |||| |||||||| |||||| |||||||| Sbjct 30 GCCCTCGGGGAAGGGGAATTTGCCGGGGAGCTGACCGGGAAAAATATCTTTCTGGACGGT 89 Query 14661 ACAGCGCTGGAGAATGCTGACGGCTCCCAAAACTTCAGCGGGGTAACGTGGGAGTTTCGC 14720 ||| |||| |||||||||||| || ||||||| ||||| |||||| | || Sbjct 90 ACACCGCTACTGAATGCTGACGGATCAGAAAACTTTCCTGGGGTGGTGTGGGAATACCGT 149 Query 14721 GCGGGAACGCAGGCGCAAAAATATATTCAGGGTATTCCCGGTACCGAAAACGAGATCAGC 14780 | ||||| |||||||||| || |||||||| || || | | || || || || | | Sbjct 150 CCCGGAACTCAGGCGCAAATCTACATTCAGGGGATGCCGGCGGCGGAGAATGAAATTACC 209 Query 14781 GTAGGAACTGAGGTATCAAGTGCCACAGCCTGGACGCGCACGTTTACCAATACGCAGCTT 14840 || || || || || ||| | ||| ||| | || |||||| ||||||| Sbjct 210 GTTGGTACCACTGTGCAGAGCAGCACGCCGTGGGCGCATGCATTCACCAATCCGCAGCTG 269 Query 14841 TCAGCAGTTCGCCTGCGTCTTAAATGGCCCTCGCTTTT 14878 || || | ||| | || || |||||||| || || || Sbjct 270 TCCGCTATCCGCGTCCGCCTGAAATGGCCGTCCCTGTT 307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124624154200032