Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_019715.1 Length=39578 Score E Sequences producing significant alignments: (Bits) Value seq83063 134 3e-27 seq42976 127 5e-25 >seq83063 Length=222 Score = 134 bits (148), Expect = 3e-27 Identities = 145/190 (76%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 12782 CATGCTGCAGCTGAATATCCTCGCGAGTGTTGCGGCGTGGTGGCGCAGAAAAGCCGTGT- 12840 ||||| | | ||||||||| || ||||| ||||| ||| | ||||| ||| |||||| Sbjct 35 CATGCAGAACGTGAATATCCCCGTGAGTGCTGCGGGGTGATCGCGCAAAAATCCCGTGTG 94 Query 12841 -TGAACGTTATTTCCCGTGCCGGAATCTTGCCGCGGCGCCGGAGGACAATTTTGTCCTTT 12899 |||| |||||||| || || ||| | || | | |||||||| |||||||| | | Sbjct 95 GTGAAA--TATTTCCCCTGTCGCAATATCGCGGTTTCTCCGGAGGAACATTTTGTCTTAT 152 Query 12900 GCCCGGAAGATTACGCAGCTGCTGAGGACTGGGGTACGGTGATCGCCATCGTTCACAGTC 12959 |||||||||||||| ||||| || || ||||| |||||||||| || |||||||||| Sbjct 153 CGCCGGAAGATTACGCCGCTGCGGATGATTGGGGAACGGTGATCGGTATTGTTCACAGTC 212 Query 12960 ACCCTGACGC 12969 | || || || Sbjct 213 ATCCGGATGC 222 >seq42976 Length=315 Score = 127 bits (140), Expect = 5e-25 Identities = 195/278 (70%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 14553 GCGCTTGGGGAAGGGGAGTTTGCTGGACAGCTCACCGGGAAGGATATCTACCTGGACGGA 14612 || || ||||||||||| ||||| || |||| |||||||| |||||| |||||||| Sbjct 30 GCCCTCGGGGAAGGGGAATTTGCCGGGGAGCTGACCGGGAAAAATATCTTTCTGGACGGT 89 Query 14613 ACAGCGCTGGAGAATGCTGACGGCTCCCAAAACTTCAGCGGGGTAACGTGGGAGTTTCGC 14672 ||| |||| |||||||||||| || ||||||| ||||| |||||| | || Sbjct 90 ACACCGCTACTGAATGCTGACGGATCAGAAAACTTTCCTGGGGTGGTGTGGGAATACCGT 149 Query 14673 GCGGGAACGCAGGCGCAAAAATATATTCAGGGTATTCCCGGTACCGAAAACGAGATCAGC 14732 | ||||| |||||||||| || |||||||| || || | | || || || || | | Sbjct 150 CCCGGAACTCAGGCGCAAATCTACATTCAGGGGATGCCGGCGGCGGAGAATGAAATTACC 209 Query 14733 GTAGGAACTGAGGTATCAAGTGCCACAGCCTGGACGCGCACGTTTACCAATACGCAGCTT 14792 || || || || || ||| | ||| ||| | || |||||| ||||||| Sbjct 210 GTTGGTACCACTGTGCAGAGCAGCACGCCGTGGGCGCATGCATTCACCAATCCGCAGCTG 269 Query 14793 TCAGCAGTTCGCCTGCGTCTTAAATGGCCCTCGCTTTT 14830 || || | ||| | || || |||||||| || || || Sbjct 270 TCCGCTATCCGCGTCCGCCTGAAATGGCCGTCCCTGTT 307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126388608214560