Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_019716.1 Length=44510 Score E Sequences producing significant alignments: (Bits) Value seq58932 118 3e-22 seq60920 84.2 6e-12 >seq58932 Length=406 Score = 118 bits (130), Expect = 3e-22 Identities = 225/331 (68%), Gaps = 3/331 (1%) Strand=Plus/Plus Query 29538 TGAAAGTACCAATAAAGGTTTCTACTTTGCTGTCTTTGAATTTCTCAACAAGCAGATCAC 29597 |||| |||| ||| |||| | | || | |||| |||||| ||| | |||||||||| Sbjct 43 TGAATTTACCGATATAGGTCTGGATTTCAGTTTCTTCGAATTTATCAGCCAGCAGATCAC 102 Query 29598 GAAATTCGTTAGCCATATCTTCCTGCACCGCTTCCAGCTGAATAATGCGCAGAACCAGTA 29657 | ||||| | || || | |||| || |||| |||||| ||| ||||| ||||| | Sbjct 103 GGAATTCCTGGGCGATTTGCTCCTCCAGTTTTTCCTGCTGAACAATACGCAGTACCAGCA 162 Query 29658 CAGGACGATCGCCA---GTGATAATGCTGAGGCGTAATTTAAACGGACGTTCTTTCAGAC 29714 |||| ||| ||| || | || |||| || | ||| | | |||||| ||| Sbjct 163 CAGGTACATCACCACCGGTCAGAACGCTGTAACGCAGTTTGATAGCACGTTCAGACAGTT 222 Query 29715 CTTCAAACGGAACGCATTTAAATTCAAATGCCACTGGCATAATGTCTTTGGTCTTCGCTT 29774 | || | || ||| |||| | ||| | | ||||| | ||| | | ||||||| Sbjct 223 CATCGTATGGTGTGCAGGTAAACTGGAATACTGCAGGCATGACGTCACGGCTTTTCGCTT 282 Query 29775 CGACAGATTCCATCAGGGAGCGTTTGCCGCTGAAGTCATTATCTTCAAAATCAGCGGTCT 29834 | || |||||||| ||||| || ||| ||| ||| | |||||| ||| |||| Sbjct 283 CCACGCTTTCCATCACAGAGCGCTTAGCGCCGAAATCACTGTCTTCATGATCTGCGGAGC 342 Query 29835 GGTTTGCTTCAATCGTGATTTTACGGACTGC 29865 || ||||||| || |||||||| || || || Sbjct 343 GGCTTGCTTCGATGGTGATTTTGCGTACAGC 373 >seq60920 Length=372 Score = 84.2 bits (92), Expect = 6e-12 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 29929 CCAGTCTTCAATCCATTCTGCCAGTGACTTCTGGGAGTTACGCTCGCCGTTAACAGACAA 29988 ||| ||| | | ||| ||||||||| ||||||| | ||| |||||||||| || Sbjct 1 CCAATCTCCCAGCCACTCTGCCAGTTCCTTCTGGCCCTGACGGCGGCCGTTAACATTCAG 60 Query 29989 CAGGGCAGAGAACGGTGCTGTCTTTTTCAGTTTGAGAGTGGCGGTGTTATCTGCGTGACC 30048 ||| | | || |||||||||||||||||| | ||||| || || || || || || Sbjct 61 CAGTGATGCAAAAGGTGCTGTCTTTTTCAGTGATACGGTGGCTGTATTGTCAGCATGCCC 120 Query 30049 TGGTTCATCAATAGTACCCAGGTTAAGTACACTGACGGCACGCATATTATCAGCATCGAT 30108 || || | || ||||| | |||| | | | ||| ||| | ||||||||| || Sbjct 121 CGGCTCGCCGATGGTACCGATATTAAAAATAGTTTTAGCAGCCATTTCATCAGCATCAAT 180 Query 30109 AAAGCAGCGGGTGCCTTCATC 30129 ||| |||| | ||||| || Sbjct 181 AAAACAGCTGACACCTTCCTC 201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142153621257408