Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_019716.1
Length=44510
Score E
Sequences producing significant alignments: (Bits) Value
seq58932 118 3e-22
seq60920 84.2 6e-12
>seq58932
Length=406
Score = 118 bits (130), Expect = 3e-22
Identities = 225/331 (68%), Gaps = 3/331 (1%)
Strand=Plus/Plus
Query 29538 TGAAAGTACCAATAAAGGTTTCTACTTTGCTGTCTTTGAATTTCTCAACAAGCAGATCAC 29597
|||| |||| ||| |||| | | || | |||| |||||| ||| | ||||||||||
Sbjct 43 TGAATTTACCGATATAGGTCTGGATTTCAGTTTCTTCGAATTTATCAGCCAGCAGATCAC 102
Query 29598 GAAATTCGTTAGCCATATCTTCCTGCACCGCTTCCAGCTGAATAATGCGCAGAACCAGTA 29657
| ||||| | || || | |||| || |||| |||||| ||| ||||| ||||| |
Sbjct 103 GGAATTCCTGGGCGATTTGCTCCTCCAGTTTTTCCTGCTGAACAATACGCAGTACCAGCA 162
Query 29658 CAGGACGATCGCCA---GTGATAATGCTGAGGCGTAATTTAAACGGACGTTCTTTCAGAC 29714
|||| ||| ||| || | || |||| || | ||| | | |||||| |||
Sbjct 163 CAGGTACATCACCACCGGTCAGAACGCTGTAACGCAGTTTGATAGCACGTTCAGACAGTT 222
Query 29715 CTTCAAACGGAACGCATTTAAATTCAAATGCCACTGGCATAATGTCTTTGGTCTTCGCTT 29774
| || | || ||| |||| | ||| | | ||||| | ||| | | |||||||
Sbjct 223 CATCGTATGGTGTGCAGGTAAACTGGAATACTGCAGGCATGACGTCACGGCTTTTCGCTT 282
Query 29775 CGACAGATTCCATCAGGGAGCGTTTGCCGCTGAAGTCATTATCTTCAAAATCAGCGGTCT 29834
| || |||||||| ||||| || ||| ||| ||| | |||||| ||| ||||
Sbjct 283 CCACGCTTTCCATCACAGAGCGCTTAGCGCCGAAATCACTGTCTTCATGATCTGCGGAGC 342
Query 29835 GGTTTGCTTCAATCGTGATTTTACGGACTGC 29865
|| ||||||| || |||||||| || || ||
Sbjct 343 GGCTTGCTTCGATGGTGATTTTGCGTACAGC 373
>seq60920
Length=372
Score = 84.2 bits (92), Expect = 6e-12
Identities = 139/201 (69%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 29929 CCAGTCTTCAATCCATTCTGCCAGTGACTTCTGGGAGTTACGCTCGCCGTTAACAGACAA 29988
||| ||| | | ||| ||||||||| ||||||| | ||| |||||||||| ||
Sbjct 1 CCAATCTCCCAGCCACTCTGCCAGTTCCTTCTGGCCCTGACGGCGGCCGTTAACATTCAG 60
Query 29989 CAGGGCAGAGAACGGTGCTGTCTTTTTCAGTTTGAGAGTGGCGGTGTTATCTGCGTGACC 30048
||| | | || |||||||||||||||||| | ||||| || || || || || ||
Sbjct 61 CAGTGATGCAAAAGGTGCTGTCTTTTTCAGTGATACGGTGGCTGTATTGTCAGCATGCCC 120
Query 30049 TGGTTCATCAATAGTACCCAGGTTAAGTACACTGACGGCACGCATATTATCAGCATCGAT 30108
|| || | || ||||| | |||| | | | ||| ||| | ||||||||| ||
Sbjct 121 CGGCTCGCCGATGGTACCGATATTAAAAATAGTTTTAGCAGCCATTTCATCAGCATCAAT 180
Query 30109 AAAGCAGCGGGTGCCTTCATC 30129
||| |||| | ||||| ||
Sbjct 181 AAAACAGCTGACACCTTCCTC 201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 142153621257408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |