Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_019717.1 Length=45366 Score E Sequences producing significant alignments: (Bits) Value seq42976 154 4e-33 seq83063 111 5e-20 >seq42976 Length=315 Score = 154 bits (170), Expect = 4e-33 Identities = 219/308 (71%), Gaps = 0/308 (0%) Strand=Plus/Plus Query 15624 AGTCCGTAGCGAAGGCCAAAATTCTTGTTGCGCTGGGAGAGGGGGAATTTGCAGGACAGT 15683 ||||||| || || || ||| | || | || || || || ||||||||||| || || Sbjct 1 AGTCCGTTGCCAAAGCGAAATTGCTGATCGCCCTCGGGGAAGGGGAATTTGCCGGGGAGC 60 Query 15684 TGACGGCGAAGGATATCTATCTCGATGGAACTCCACTGGAGAATGCGGACGGATCGCAAA 15743 |||| | ||| |||||| ||| || || || || || |||||| |||||||| ||| Sbjct 61 TGACCGGGAAAAATATCTTTCTGGACGGTACACCGCTACTGAATGCTGACGGATCAGAAA 120 Query 15744 ACTTCAGCGGCGTGGCGTGGGAATTTCGCCCAGGGACTCAGGCACAAAAATACATTCAGG 15803 |||| || |||| |||||||| || || || |||||||| |||| |||||||||| Sbjct 121 ACTTTCCTGGGGTGGTGTGGGAATACCGTCCCGGAACTCAGGCGCAAATCTACATTCAGG 180 Query 15804 GTATCCCCGGTACCGAAAATGAAATCAGCGTGGGCACCGAAGTGTCAAGCACCACCGGCT 15863 | || || | | || |||||||| | ||| || ||| ||| |||| ||| | Sbjct 181 GGATGCCGGCGGCGGAGAATGAAATTACCGTTGGTACCACTGTGCAGAGCAGCACGCCGT 240 Query 15864 GGACACATACCTTTACCAACACGCAACTGTCAGCCGTTCGCCTGCGCCTCAAGTGGCCAT 15923 || | ||| | || ||||| |||| ||||| || | ||| | ||||| || ||||| | Sbjct 241 GGGCGCATGCATTCACCAATCCGCAGCTGTCCGCTATCCGCGTCCGCCTGAAATGGCCGT 300 Query 15924 CGCTTTTT 15931 | || ||| Sbjct 301 CCCTGTTT 308 >seq83063 Length=222 Score = 111 bits (122), Expect = 5e-20 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 13963 GAATATCCGCGCGAGTGCTGCGGCGTGGTGGCACAGAAAAGCCGGGTTGAGCGCTATTTT 14022 |||||||| || ||||||||||| ||| | || || ||| ||| || | | ||||| Sbjct 47 GAATATCCCCGTGAGTGCTGCGGGGTGATCGCGCAAAAATCCCGTGTGGTGAAATATTTC 106 Query 14023 CCCTGTCGTAATCTCGCAGCAGAGCCGACTGAACATTTTCACCTGTCCCCCGAAGATTAC 14082 |||||||| ||| |||| | ||| ||||||||| | | || || ||||||||| Sbjct 107 CCCTGTCGCAATATCGCGGTTTCTCCGGAGGAACATTTTGTCTTATCGCCGGAAGATTAC 166 Query 14083 GCAGCGGCAGAAGACTGGGGGACCGTGGTGGCCATTGTTCACAGCCATCCTGATGC 14138 || || || || || ||||| || ||| | | ||||||||||| ||||| ||||| Sbjct 167 GCCGCTGCGGATGATTGGGGAACGGTGATCGGTATTGTTCACAGTCATCCGGATGC 222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144889803569792