Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_019721.1 Length=40029 Score E Sequences producing significant alignments: (Bits) Value seq42976 140 8e-29 seq83063 138 3e-28 >seq42976 Length=315 Score = 140 bits (154), Expect = 8e-29 Identities = 214/305 (70%), Gaps = 0/305 (0%) Strand=Plus/Plus Query 14245 TCTGTAGCGAAGGCAAAAATCCTCGTTGCGCTTGGGGAAGGGGAGTTTGCAGGGCAGCTA 14304 || || || || || ||| | || | || || ||||||||||| ||||| ||| |||| Sbjct 3 TCCGTTGCCAAAGCGAAATTGCTGATCGCCCTCGGGGAAGGGGAATTTGCCGGGGAGCTG 62 Query 14305 ACCGGCAAAGATATCTACCTGGACGGAACGGCGCTGGAGAATGCCGACGGTTCCCAAAAC 14364 ||||| ||| |||||| |||||||| || |||| |||||| ||||| || ||||| Sbjct 63 ACCGGGAAAAATATCTTTCTGGACGGTACACCGCTACTGAATGCTGACGGATCAGAAAAC 122 Query 14365 TTTAGCGGCGTGACGTGGGAGTTTCGCGCGGGAACGCAGGCGCAAAAATATATTCAGGGT 14424 ||| || ||| |||||| | || | ||||| |||||||||| || |||||||| Sbjct 123 TTTCCTGGGGTGGTGTGGGAATACCGTCCCGGAACTCAGGCGCAAATCTACATTCAGGGG 182 Query 14425 ATTCCCGGTACCGAAAACGAAATCAGCGTAGGAACTGAGGTATCAAGCGCTACAGCATGG 14484 || || | | || || ||||| | ||| || || || ||| || | ||| Sbjct 183 ATGCCGGCGGCGGAGAATGAAATTACCGTTGGTACCACTGTGCAGAGCAGCACGCCGTGG 242 Query 14485 ACGCGCACCTTTACCAATACGCAGCTTTCAGCAGTTCGCCTGCGTCTGAAATGGCCTTCG 14544 ||| | || |||||| ||||||| || || | ||| | || ||||||||||| || Sbjct 243 GCGCATGCATTCACCAATCCGCAGCTGTCCGCTATCCGCGTCCGCCTGAAATGGCCGTCC 302 Query 14545 CTTTT 14549 || || Sbjct 303 CTGTT 307 >seq83063 Length=222 Score = 138 bits (152), Expect = 3e-28 Identities = 153/202 (76%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 12331 GCCATTATGGCGCATGCTGCAGCTGAATATCCTCGCGAGTGCTGCGGCGTGGTGGCGCAG 12390 |||||| | | ||||| | | ||||||||| || ||||||||||| ||| | ||||| Sbjct 23 GCCATTTTTTCACATGCAGAACGTGAATATCCCCGTGAGTGCTGCGGGGTGATCGCGCAA 82 Query 12391 AAAAGCCGTGT--TGAACGTTATTTCCCGTGCCGCAATCTTGCCACGGAACCGGAGGACA 12448 ||| |||||| |||| |||||||| || |||||| | || |||||||| Sbjct 83 AAATCCCGTGTGGTGAA--ATATTTCCCCTGTCGCAATATCGCGGTTTCTCCGGAGGAAC 140 Query 12449 ATTTTGTCCTCTGCCCGGAAGATTACGCAGCTGCTGAGGACTGGGGCACGGTGATCGCCA 12508 |||||||| | | |||||||||||||| ||||| || || ||||| |||||||||| | Sbjct 141 ATTTTGTCTTATCGCCGGAAGATTACGCCGCTGCGGATGATTGGGGAACGGTGATCGGTA 200 Query 12509 TCGCTCACAGTCACCCTGATGC 12530 | | ||||||||| || ||||| Sbjct 201 TTGTTCACAGTCATCCGGATGC 222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127830218288024