Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_019769.1 Length=38964 Score E Sequences producing significant alignments: (Bits) Value seq42976 131 4e-26 seq83063 125 2e-24 >seq42976 Length=315 Score = 131 bits (144), Expect = 4e-26 Identities = 213/307 (69%), Gaps = 0/307 (0%) Strand=Plus/Plus Query 14081 AGTCAGTTGCGAAGGCGAAAATTTTAATCGCCCTTGGCGAGGGCGAGTTCTCCGGGCAAT 14140 |||| ||||| || |||||| | | |||||||| || || || || || ||||| | Sbjct 1 AGTCCGTTGCCAAAGCGAAATTGCTGATCGCCCTCGGGGAAGGGGAATTTGCCGGGGAGC 60 Query 14141 TAACCGGCAAAGATATCTACCTGGACGGAACAGCGCTGGAGAATGCTGACGGCTCCCAAA 14200 | ||||| ||| |||||| |||||||| ||| |||| |||||||||||| || ||| Sbjct 61 TGACCGGGAAAAATATCTTTCTGGACGGTACACCGCTACTGAATGCTGACGGATCAGAAA 120 Query 14201 ACTTCAGCGGGGTAACGTGGGAGTTTCGCGCGGGAACGCAGGCGCAAAAATATATTCAGG 14260 |||| ||||| |||||| | || | ||||| |||||||||| || ||||||| Sbjct 121 ACTTTCCTGGGGTGGTGTGGGAATACCGTCCCGGAACTCAGGCGCAAATCTACATTCAGG 180 Query 14261 GTATTCCCGGTACCGAAAACGAGATCAGCGTAGGAACTGAGGTATCAAGTGCCACAGCCT 14320 | || || | | || || || || | ||| || || || || ||| | | Sbjct 181 GGATGCCGGCGGCGGAGAATGAAATTACCGTTGGTACCACTGTGCAGAGCAGCACGCCGT 240 Query 14321 GGACGCGCACGTTTACCAATACGCAGCTTTCAGCAGTTCGCCTGCGTCTTAAATGGCCCT 14380 || ||| | || |||||| ||||||| || || | ||| | || || |||||||| | Sbjct 241 GGGCGCATGCATTCACCAATCCGCAGCTGTCCGCTATCCGCGTCCGCCTGAAATGGCCGT 300 Query 14381 CGCTTTT 14387 | || || Sbjct 301 CCCTGTT 307 >seq83063 Length=222 Score = 125 bits (138), Expect = 2e-24 Identities = 143/190 (75%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 12338 CATGCTGCAGCTGAATATCCTCATGAGTGTTGCGGCGTGGTGGCGCAGAAAAGCCGCGT- 12396 ||||| | | ||||||||| | |||||| ||||| ||| | ||||| ||| ||| || Sbjct 35 CATGCAGAACGTGAATATCCCCGTGAGTGCTGCGGGGTGATCGCGCAAAAATCCCGTGTG 94 Query 12397 -TGAACGTTATTTCCCGTGCCGGAATCTTGCCGCGGCGCCGGAGGACAATTTTGTCCTTT 12455 |||| |||||||| || || ||| | || | | |||||||| |||||||| | | Sbjct 95 GTGAAA--TATTTCCCCTGTCGCAATATCGCGGTTTCTCCGGAGGAACATTTTGTCTTAT 152 Query 12456 GCCCCGAAGACTACGCAGCTGCTGAGGACTGGGGAACGGTGATCGCCATCGTTCACAGTC 12515 || ||||| ||||| ||||| || || |||||||||||||||| || |||||||||| Sbjct 153 CGCCGGAAGATTACGCCGCTGCGGATGATTGGGGAACGGTGATCGGTATTGTTCACAGTC 212 Query 12516 ACCCTGACGC 12525 | || || || Sbjct 213 ATCCGGATGC 222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124425972770864