Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_019932.1 Length=29564 Score E Sequences producing significant alignments: (Bits) Value seq75839 152 1e-32 seq39865 98.7 2e-16 >seq75839 Length=248 Score = 152 bits (168), Expect = 1e-32 Identities = 147/189 (78%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 15229 TCTTCCGGGCGCATAAACATCAGCATATGCCAGTGCGGGGTGCCGTCATGGTGCGGCTCG 15288 ||||||||||||||||| | |||||||||||||||||||| ||||||||||| ||||| Sbjct 223 TCTTCCGGGCGCATAAAGAAAAGCATATGCCAGTGCGGGGTTCCGTCATGGTGAGGCTCT 164 Query 15289 GCAACACGAATCCCGAAAATACGGATATCTTCACGATGAAGCTTGGAGCGGATTTTCTGC 15348 ||||| ||||| || || || || | ||| || || ||||| || | || ||||| | Sbjct 163 GCAACGCGAATACCAAAGATCCGTAAATCATCCCGGTGAAGTTTCGCCCGAATTTTACTC 104 Query 15349 CATACATTGCACAGGTAACGCTGGGTATCTGACGGGCTGGCACCGTTCCACTTACGATTG 15408 ||||| || | ||||| ||| || |||| ||||||| |||||||| || || || Sbjct 103 CATACTTTACTGAGGTATTTCTGCGTGTCTGCCGGGCTGCTTCCGTTCCATTTGCGGTTA 44 Query 15409 CGGTGACCG 15417 ||||| ||| Sbjct 43 CGGTGCCCG 35 >seq39865 Length=1072 Score = 98.7 bits (108), Expect = 2e-16 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 15586 CGGTTGCCTTCCTCGTCTTCTAAATCCATACCTTTGAGATACTCACGGGTGCGGCGCTTC 15645 ||||| |||||||| |||| | |||||| ||||||| | ||||| || || ||||| Sbjct 865 CGGTTTCCTTCCTCATCTTTCAGTTCCATAGATTTGAGAAATTCACGTGTCCGCCGCTTT 806 Query 15646 TGTTCGCGCCATTCAATAACAGTCATTGAGCTGGCGTAAGGGGTATGCTTTTTGCTGACG 15705 ||||| ||||||||| | | ||| | |||||| ||| | | ||||||||| || Sbjct 805 TGTTCCCGCCATTCACTGATAGTTACCCTGCTGGCATAAATACTTTTCTTTTTGCTCACA 746 Query 15706 TTCGCCAGGGCAATTTGCAGATGCTCACGCCATG 15739 || | || |||||||| ||||||||||||| Sbjct 745 TTGTTTAATGCGATTTGCAGGTGCTCACGCCATG 712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94379110929264