Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq1881 212 4e-49
seq17588 156 3e-32
seq3881 102 5e-16
seq11635 100 2e-15
seq13417 86.0 4e-11
>seq1881
Length=198091
Score = 212 bits (234), Expect = 4e-49
Identities = 373/537 (69%), Gaps = 10/537 (2%)
Strand=Plus/Plus
Query 474333 TTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAG 474392
|||| |||||| | || || || ||| |||||| | ||| | || | || ||||| |
Sbjct 78964 TTGGCATTGATCTTGGCACCACCTACTCTTGTGTGGGTGTCTTCCAGCACGGGAAAGTGG 79023
Query 474393 AAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAA 474452
|||||||||||||||| || || || |||| || ||| |||||| | |||||||| |
Sbjct 79024 AAATAATTGCCAATGATCAGGGAAACCGAACCACCCCAAGTTATGTTGCCTTTACTGATA 79083
Query 474453 CTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTA 474512
| ||| | || || |||||||| || | |||| |||| || || ||| ||
Sbjct 79084 CCGAATGATTGATCGGTGATGCTGCAAAGAACCAAGTTGCAATGAACCCCACTAACACGG 79143
Query 474513 TTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATA 474572
|||||||||| || | | || || |||| ||||||||| | ||||||||| ||||
Sbjct 79144 TTTTTGATGCCAAGCGTCTTATAGGACGTAGATTTGATGATGCTGTTGTCCAATCAGATA 79203
Query 474573 TGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAA--GCAAT 474630
|| |||||||| || | |||| | |||| || || | || | | || | |||
Sbjct 79204 TGAAGCATTGGCCCTTCATGGTGGTGAATGATGCAGGCAGGCCCAAGGTCCAAGTGGAAT 79263
Query 474631 ACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAA 474690
||| | || || || ||| || | || || | | || || |||||||| | ||
Sbjct 79264 ACAAG--GGAGAGACAAAAAGTTTCTATCCAGAGGAGGTGTCATCTATGGTTTTGACAAA 79321
Query 474691 AATGAAACAAACCGC--GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAATTAC 474747
|||||| ||| || |||| ||||| || |||| || || |||| || | ||
Sbjct 79322 AATGAAGGAAATTGCAGAAGCT--TATCTAGG-GAAGACTGTTACCAATGCTGTTGTCAC 79378
Query 474748 TGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGC 474807
||| || || ||||| ||||| ||||| | ||| ||||| |||||||| |||| |||||
Sbjct 79379 TGTACCTGCTTATTTCAATGACTCTCAGCATCAGGCAACCAAAGATGCTGGAACTATTGC 79438
Query 474808 AGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864
||||| ||||| | | || || ||||| ||||| || || || |||||||||
Sbjct 79439 TGGTCTCAATGTACTCAGGATCATCAATGAGCCAACTGCTGCTGCTACTGCTTATGG 79495
Score = 156 bits (172), Expect = 3e-32
Identities = 452/680 (66%), Gaps = 18/680 (3%)
Strand=Plus/Plus
Query 475548 TTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAAT 475607
|||| |||| || || | |||||||||||||| |||| ||||| | || | |
Sbjct 79780 TTGAGATTGACTCACTCTATGAAGGAATTGATTTCTATACCTCCATTACCCGTGCCAGGT 79839
Query 475608 TTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCT-C 475666
||||||| | | |||| || || | || | || ||||| || ||| || |
Sbjct 79840 TTGAAGAACTCAATGCTGACCTATTCTGTGGCACCCTGGATCCCGTAGAGAAAGCCCTGC 79899
Query 475667 AGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACA 475726
|| ||| |||| || ||||| || || ||||||| ||||| || ||||| ||||| ||
Sbjct 79900 AG-GATGCTAAGCTAGACAAGTCCCAGATCCATGATATTGTCCTAGTAGGTGGTTCTACC 79958
Query 475727 AGAATTCCAAAAATAAGAGAAATGCTTTCATCA-TATTTTAATGGTAAAAAGTTAAATGA 475785
|||| || || || ||||| | || | | || ||||| ||| | | ||| |
Sbjct 79959 CGAATCCCCAAGAT-TCAGAAACTTCTGCAGGACTTCTTCAATGGAAAAGAACTGAATAA 80017
Query 475786 AAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATC 475845
|| | || |||||||| |||||||| ||||| || |||||||| ||||| ||| | ||
Sbjct 80018 GAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTCCAGGCAGCCATTCTGTC 80077
Query 475846 AGGTCAATCAGACGAGAAACTAAATAATATTGTACT--TGTT-GACGTAACTCCACTTTC 475902
|| | || | |||| | || ||| | || |||| || || ||||| |||||
Sbjct 80078 TGG--AGACAAATCTGAAAATGTTCAAGATT-TGCTGCTGTTAGATGTCACTCCTCTTTC 80134
Query 475903 ATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTAT 475962
| ||| ||||||| | ||| ||| | ||||| || || | | ||||| | ||
Sbjct 80135 CCTTGGTATTGAAACTGCTGGTGGGGTCATGACAGTCCTCATCAAGCGCAATACAACCAT 80194
Query 475963 CCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCAT 476022
|| ||| | || || || | || || ||||| || || | ||| |||
Sbjct 80195 TCCTACCAAGCAGACACAAACCTTCACTACCTACTCTGACAACCAGCCTGGTGTGCTCAT 80254
Query 476023 CCAAATCTTTGAAGGTGA--AAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTT 476080
|| | | ||||||||| | | | | || | ||||| ||| ||||| | ||
Sbjct 80255 TCAGGTTTATGAAGGTGAGCATGCCA--TGACCAGGGATAACAACCTGCTTGGCAAGTTC 80312
Query 476081 AATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGAT 476140
| || ||| || || | ||| ||| | || |||||||| |||||||| ||||||||
Sbjct 80313 GAACTCACAGGCATACCACTTGCCCCCCGTGGTGTTCCTCAGATTGAAGTCACTTTTGAC 80372
Query 476141 ATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATA--AATCTAGTAACAAGAGTA 476198
| |||||| ||||| || || ||||| ||||| ||||| | | || || ||||| |
Sbjct 80373 ACTGATGCCAATGGCATCCTCAATGTCTCTGCTGTTGATAAGAGTACAGGAA-AAGAG-A 80430
Query 476199 AAAATATAACTATTACAAAC 476218
| || || ||||| || |||
Sbjct 80431 ACAAGATCACTATCACTAAC 80450
>seq17588
Length=70272
Score = 156 bits (172), Expect = 3e-32
Identities = 268/388 (69%), Gaps = 12/388 (3%)
Strand=Plus/Minus
Query 475785 AAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTAT 475844
|| |||| || || ||||| | ||||| | || |||||||| |||| ||| |||||
Sbjct 32102 AAGGTGTTAACCCAGATGAGGTAGTTGCTTTAGGTGCTGCTGTACAAGGTGCTGTTTTAA 32043
Query 475845 CAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCAT 475904
| | |||| || |||| | |||| || | || |||||||| |||||||
Sbjct 32042 CTG---------ACGA--AATTAAAGG-TGTTGTTCTATTAGATGTAACTCCTCTTTCAT 31995
Query 475905 TAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCC 475964
||||| |||| ||| | || || | |||||||| |||||||| || ||| |||| |
Sbjct 31994 TAGGTATTGAGACACTAGGTGGTGTAATGACTAAACTTATTGATGCTAACACTACTATTC 31935
Query 475965 CATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCC 476024
| || || ||| | || || || || | ||||| |||||| ||||| || |
Sbjct 31934 CTTGTAAGAAAGCTGAAACTTTCTCAACAGCGGCAGATAACCAAACAGAGGTAACAATTC 31875
Query 476025 AAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATC 476084
| | || ||||||||||| | | | || | ||||| | |||| | ||| || |
Sbjct 31874 ATGTGCTTCAAGGTGAAAGACCAATGGCCAACCAAAATAAAACTATTGGTAATTTCAACC 31815
Query 476085 TTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTG 476144
| ||||||| ||||||| | | || |||||||||||||||| | |||||||||||
Sbjct 31814 TAACAGGTATTGCTCCTGCACAGCGTGGTATTCCTCAAATTGAAGTAAGTTTTGATATTG 31755
Query 476145 ATGCAAATGGTATTCTTAATGTTACTGC 476172
|||| || ||||| | | |||| ||||
Sbjct 31754 ATGCTAACGGTATCTTGAGTGTTTCTGC 31727
Score = 150 bits (166), Expect = 1e-30
Identities = 162/212 (76%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 474663 AACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCA-TATCTTGGA 474721
|| || ||||| ||||||| | |||||||| ||||| || || | ||| | |||
Sbjct 32843 AAGAACTTTCTGCAATGGTACTTCAAAAAATGAAGCAAACTGC-AGAAGACTATTTAGGA 32785
Query 474722 CAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAA 474781
||||||||||| || || |||||||| ||||| |||||||| || || |||||||||
Sbjct 32784 CAAGAAGTAACAGAGGCTGTAATTACAGTTCCTGCATATTTCTCAGACTCACAACGTCAA 32725
Query 474782 GCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCA 474841
|| || ||||| || || ||||||||||||| | || |||||||||||| |||||
Sbjct 32724 GCTACAAAAGAGGCTGGTCAAATTGCAGGTCTTGAGGTGAAACGTATTATTAACGAACCT 32665
Query 474842 ACAGCAGCCGCACTTGCTTATGGTCTTGATAA 474873
|| || || || |||||||| ||| |||| ||
Sbjct 32664 ACTGCTGCTGCTCTTGCTTACGGTGTTGAAAA 32633
>seq3881
Length=138185
Score = 102 bits (112), Expect = 5e-16
Identities = 106/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794
|||| || || ||||| ||||| ||||| ||||| || ||| | || |||||||| ||||
Sbjct 63912 ATGCTGTGATCACTGTGCCAGCCTATTTCAATGACTCACAATGACAGGCAACTAAGGATG 63971
Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854
| || ||||||||||| ||||| || | ||||| ||||| || ||||| || ||
Sbjct 63972 CAGGCGTGATTGCAGGTCTCAATGTGCTAAGAATTATCAATGAGCCCACAGCTGCTGCCA 64031
Query 474855 TTGCTTATGGTCTTGATAA 474873
|||| ||||| | |||||
Sbjct 64032 TTGCCTATGGCTTAGATAA 64050
>seq11635
Length=64061
Score = 100 bits (110), Expect = 2e-15
Identities = 94/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 627769 CCATCACGTCCTGCTCTACCTATTTCTTGATAATAACCTTCGATATTTTTAGGTGCGCCA 627828
||||| | || ||||||||||||||||| ||||| | ||| || |||||||
Sbjct 57642 CCATCTCTCCCAGCTCTACCTATTTCTTGGTAATAGCTTTCAATGCTTTTAGGCATATTG 57583
Query 627829 TAATGTATTACTGCTCTCACATCTGATTTATTAATACCCATTCCAAATGCAATTGTTGCA 627888
|||||||| || ||| |||| |||||||| ||||||||||||||| |||||||| |||
Sbjct 57582 TAATGTATAACCCATCTTACATTTGATTTATCAATACCCATTCCAAAAGCAATTGTAGCA 57523
Score = 100 bits (110), Expect = 2e-15
Identities = 94/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 627769 CCATCACGTCCTGCTCTACCTATTTCTTGATAATAACCTTCGATATTTTTAGGTGCGCCA 627828
||||| | || ||||||||||||||||| ||||| | ||| || |||||||
Sbjct 58055 CCATCTCTCCCAGCTCTACCTATTTCTTGGTAATAGCTTTCAATGCTTTTAGGCATATTG 57996
Query 627829 TAATGTATTACTGCTCTCACATCTGATTTATTAATACCCATTCCAAATGCAATTGTTGCA 627888
|||||||| || ||| |||| |||||||| ||||||||||||||| |||||||| |||
Sbjct 57995 TAATGTATAACCCATCTTACATTTGATTTATCAATACCCATTCCAAAAGCAATTGTAGCA 57936
>seq13417
Length=55113
Score = 86.0 bits (94), Expect = 4e-11
Identities = 95/127 (75%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 476035 AGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTAT 476094
||||||| || | || ||||| ||| || || ||||||||| |||| || ||
Sbjct 18745 AGGTGAACGACCCCTGACGAAAGACAATCACCTTCTGGGAACTTTTGATCTGACGGGAAT 18686
Query 476095 TCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGG 476154
|||||||||||| | || ||||| || |||||||| || ||||| || |||| |||||
Sbjct 18685 TCCTCCTGCTCCTCGTGGGGTTCCACAGATTGAAGTCACCTTTGAGATAGATGTGAATGG 18626
Query 476155 TATTCTT 476161
||||||
Sbjct 18625 CATTCTT 18619
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3264199758790256
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