Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq22040 150 2e-31
>seq22040
Length=22008
Score = 150 bits (166), Expect = 2e-31
Identities = 179/240 (75%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 138174 TGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAAT 138233
||||||||||| | |||||||||||| ||||| || ||||| ||||| |||||| ||
Sbjct 17935 TGTTTTGCTACGCAAATAGGACCTACACCAGGGCCACCACCACCATGAGGAATAGCAAAG 17994
Query 138234 GTCTTATGTAAATTTAGATGACATACATCTGCACC-ATAGTCACATGGTTTTGCTAGACC 138292
|||||||||| || || |||||||| ||||| || ||| || || |||| || ||
Sbjct 17995 GTCTTATGTAGGTTAAGGTGACATACGTCTGCTCCGATAAAGCCA-GGATTTGTAAGTCC 18053
Query 138293 TACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGAT 138352
||| || ||||| | |||||||||||| | || || || | ||| || || | |
Sbjct 18054 TACTTGGGCATTCATATTTGCACCATCCATGTACACTTGTGCTCCAGCTTCGTGTATTAA 18113
Query 138353 CTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCAT 138412
||||| |||| | || || || ||||| | |||||| || |||||||| ||||||||
Sbjct 18114 GTTACACATCTCGCGTATATTGGTCTCAAAAATACCATGTGTAGATGGATAAGTAATCAT 18173
Score = 116 bits (128), Expect = 4e-21
Identities = 161/223 (72%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918
||| ||||||||| | || ||||||||||||| || || ||| | || ||| | |||
Sbjct 19656 CATAGCCTCTGCTCCAGCTGTTGCTTCATCTAGTAATGAACAGTTGGATAGTGGAAGTCC 19715
Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978
||| | || | || ||||||| |||| | ||| || || | || || || ||||
Sbjct 19716 TGTTAAATCAGAAATAGCCGTTTGGAAATTCATTAAGGCCTCGAGCCTACCTTGCGATAC 19775
Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038
|| ||||||| |||||||| || || |||||| |||||| | | || ||||| ||
Sbjct 19776 TTCTCCTTGATACGGAGTGTATGACGTATACCAAACAGGATTTTGGAATACATTTCG-TG 19834
Query 140039 T-ATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTAT 140080
| || |||| || ||||| |||||||| | |||||||| ||
Sbjct 19835 TAATAACTGCCGGAGTAATTGTTCCATACCAACCTTGACCAAT 19877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578326964505440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |