Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_021190.1 Length=46150 Score E Sequences producing significant alignments: (Bits) Value seq45960 116 1e-21 >seq45960 Length=700 Score = 116 bits (128), Expect = 1e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 40477 CCATGCATCAGCTGCGGCGAGACCAATCCGCCTGATCTGCATGGTGGCCAGTGGGATTGC 40536 |||||||||||||| || || | |||||||||||| | |||||||| |||||||| ||| Sbjct 228 CCATGCATCAGCTGTGGTGAACCTAATCCGCCTGATTTACATGGTGGGCAGTGGGACTGC 169 Query 40537 GGCCATTTCAAGACAGTAGGTGCTTACCCTGAACTGCGCTTTGAAGAACGCAACGCCCAT 40596 || ||||| | | || || | | ||||| ||||| ||||| || || || ||| | Sbjct 168 GGTCATTTTCTGTCTGTCGGGTCACATCCTGAGCTGCGGTTTGAGGAGCGAAATGCCTAC 109 Query 40597 AAGCAGTGCAAATCCTGTAATGCCGGAGCTGGCAAGTACACCGCCAAAGAGGCGACCGTG 40656 ||||| || ||||| || ||||| || || || || | | | |||| | || || Sbjct 108 AAGCAATGTAAATCATGCAATGCGGGGGCCGGTAAATTCTCACACAAAAATAACACTGTA 49 Query 40657 GCGCAGCAATACGA 40670 ||||| ||||||| Sbjct 48 ACGCAGAAATACGA 35 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147395839706368