Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_021806.1 Length=100418 Score E Sequences producing significant alignments: (Bits) Value seq11635 138 7e-28 >seq11635 Length=64061 Score = 138 bits (152), Expect = 7e-28 Identities = 196/272 (72%), Gaps = 3/272 (1%) Strand=Plus/Plus Query 96132 TTTAAAGCCTTCTTCTAGAATTTTCTGAGCTAATACTGTAGCTGTGGTTGTTCCATCTCC 96191 ||||| |||||| ||| |||| |||||||| || || ||||| || || ||||| || Sbjct 45196 TTTAACTCCTTCTGCTACAATTGCTTGAGCTAACACAGTTGCTGTTGTAGTACCATCACC 45255 Query 96192 TACTTCTGTATTAGTATTCTCAGCTACTTGTTTAATCATTTGAGCACCTAAGTTTTCAAA 96251 | | || | || || ||| |||| ||| | | |||||||||| |||| | Sbjct 45256 TGCATCGTCACCTGTTTTAGAAGCCACTTCTTTTACGAGTTGAGCACCTGTATTTTGGTA 45315 Query 96252 TGGATCTTCTAAATGAATTTCTCTAGCCACACTTACACCATCTTTAGTAATGATTGGATT 96311 |||||||||||| | ||| ||| |||| || |||||||||||||||| || || | | Sbjct 45316 TGGATCTTCTAATTCAATCTCTTTAGCTACTGTTACACCATCTTTAGTGAT-ATGTGGTG 45374 Query 96312 ATACTGGTCTAAAC-CTAGTATAACATTCTTACCTGATGGTCCTAGAGTTACTTTAACTG 96370 | | | | | ||| || ||||| |||| |||||||| |||||||| |||| Sbjct 45375 CTCCAAATTTCTTCTCTATAATTACATTACGACCTTTAGGTCCTAGTGTTACTTTTACTG 45434 Query 96371 CATTAGCTAAAGCATCTACACCTCTCTTTAAG 96402 ||||||||| ||||| |||||| |||||||| Sbjct 45435 CATTAGCTAGCGCATCAACACCT-TCTTTAAG 45465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 320849617937068