Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq6821 161 1e-33
seq3668 161 1e-33
seq9072 158 1e-32
seq14472 134 2e-25
seq16765 120 4e-21
seq6787 118 1e-20
seq12172 96.9 4e-14
seq469 91.5 2e-12
>seq6821
Length=94590
Score = 161 bits (178), Expect = 1e-33
Identities = 157/202 (78%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| |||||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 84995 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 84936
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| | |||||||| ||| |||||| ||||||| |||| |
Sbjct 84935 TGGTGGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCCTCGCCCGCGATGCGCTCGAAGA 84876
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | ||| |||||||| ||||||||
Sbjct 84875 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTAGACGAGATGCCGGTGTCGGGGT 84816
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 84815 GCACCTGCTTCAGCACCTTGTA 84794
Score = 134 bits (148), Expect = 2e-25
Identities = 151/202 (75%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| ||||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 34011 GCTTGGCCAGCTCGCCAGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 33952
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| | |||||||| ||| |||||| |||| || |||| |
Sbjct 33951 TGGTGGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCCTCGCCCGCGATACGCTCGAAGA 33892
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | ||| || ||||| ||| ||||
Sbjct 33891 TGTCGTTGACGAATGAGTTCATGATGCCCATGGCCTTAGACGAAATGCCGGTGTCCGGGT 33832
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||| ||||| |||||||||||
Sbjct 33831 GCACTTGCTTCAGCACCTTGTA 33810
>seq3668
Length=142850
Score = 161 bits (178), Expect = 1e-33
Identities = 166/217 (76%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 98646 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 98705
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| || |||||| ||||||| |||| |
Sbjct 98706 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 98765
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||||||||||||||||| ||| | |||| |||||||| ||||||||
Sbjct 98766 TGTCGTTGACAAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 98825
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
| |||||||||||||||||||| | | || ||||||
Sbjct 98826 GGACCTGCTTGAGCACCTTGTACACGTACACCGAGTA 98862
Score = 134 bits (148), Expect = 2e-25
Identities = 151/202 (75%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 109526 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 109585
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | || ||||| || |||||| ||||||| |||| |
Sbjct 109586 TGGTCGAGCGCTTGTTGTAATGAGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 109645
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
| |||||||| ||||||||||| | ||| | |||| |||||||| ||||||||
Sbjct 109646 TATCGTTGACGAACGAGTTCATAATGCCCATAGCCTTGGACGAGATGCCGGTGTCGGGGT 109705
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| ||||||||||||||||| ||
Sbjct 109706 GGACCTGCTTGAGCACCTTATA 109727
Score = 131 bits (144), Expect = 2e-24
Identities = 151/202 (75%), Gaps = 1/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 95329 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 95270
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | ||||||| || |||||| ||||||| |||| |
Sbjct 95269 TGGTCGAGCGCTTGTTGTAAAGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 95210
Query 1254463 TGTCGTTGA-CAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521
||||||||| ||||||| |||||| ||| | |||| |||||||| |||||||
Sbjct 95209 TGTCGTTGAGGAAACGAGATCATGATGCCCATGGCCTTGAACGAGATGCCGGTGTCGGGG 95150
Query 1254522 TGCACCTGCTTGAGCACCTTGT 1254543
|| ||||||||||||||| |||
Sbjct 95149 TGGACCTGCTTGAGCACCGTGT 95128
>seq9072
Length=74950
Score = 158 bits (174), Expect = 1e-32
Identities = 165/217 (76%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 38088 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 38029
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| || |||||| ||||||| |||| |
Sbjct 38028 TGGTCGAGCGCTTGTTATAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 37969
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| |||||||| ||||||||
Sbjct 37968 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 37909
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
| |||||||||||||||||||| | | || ||||||
Sbjct 37908 GGACCTGCTTGAGCACCTTGTACACGTACACCGAGTA 37872
Score = 149 bits (164), Expect = 8e-30
Identities = 163/217 (75%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 15447 GCTTGGCCAACTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 15506
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| || |||||| ||||||| |||| |
Sbjct 15507 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 15566
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||| ||||| ||||||||||||| ||| | |||| |||||||| ||||||||
Sbjct 15567 TGTCTTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCAGTGTCGGGGT 15626
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
| |||||||||||||||||||| | | || ||||||
Sbjct 15627 GGACCTGCTTGAGCACCTTGTACACGTACACCGAGTA 15663
>seq14472
Length=45083
Score = 134 bits (148), Expect = 2e-25
Identities = 151/202 (75%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 5223 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 5282
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||| ||||| | || ||||| || |||||| ||||||| |||| |
Sbjct 5283 TGGTCGAGCGTTTGTTGTAATGAGCCAGGCGCGACGCCTCGCCCGCGATGCGTTCGAAGA 5342
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| |||||||| ||||||||
Sbjct 5343 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 5402
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||||||||| || ||
Sbjct 5403 GGACCTGCTTGAGCACTTTATA 5424
Score = 125 bits (138), Expect = 9e-23
Identities = 149/202 (74%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||||||||| ||| | | | |||||||||||| ||||||||||| | | | ||
Sbjct 24408 GCTTGGCCAGTTCTCCGGGGAGCAGCAGGCGCACGGCTGTCTGGATCTCCCTGGAGGTGA 24467
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | || ||||| || |||||| ||||||| |||| |
Sbjct 24468 TGGTCGAGCGCTTGTTGTAATGAGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 24527
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||| | ||| | ||| |||||||| ||| ||||
Sbjct 24528 TGTCGTTGACGAATGAGTTCATAATGCCCATGGCTTTGGACGAGATGCCGGTGTCCGGGT 24587
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| ||||||||||| ||||||||
Sbjct 24588 GGACCTGCTTGAGTACCTTGTA 24609
>seq16765
Length=36855
Score = 120 bits (132), Expect = 4e-21
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 11580 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCTCTGGAGGTGA 11639
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | || ||||| || |||||| | ||||| |||| |
Sbjct 11640 TGGTAGAGCGCTTGTTGTAATGGGCCAGGCGCGACGCCTCGCCCGCCATGCGCTCGAAGA 11699
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||||| ||||||||||||| ||| | ||| |||||||| ||| ||||
Sbjct 11700 TGTCGTTGATGAACGAGTTCATGATGCCCATGGCCTTCGACGAGATGCCAGTGTCAGGGT 11759
Query 1254523 GCACCTGCTTGAGCACCTTGTAGA 1254546
| |||||||| ||||| || ||||
Sbjct 11760 GGACCTGCTTCAGCACTTTATAGA 11783
>seq6787
Length=94921
Score = 118 bits (130), Expect = 1e-20
Identities = 157/217 (72%), Gaps = 6/217 (3%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||||||||| || ||| | |||||||||||| ||||| ||||| | | | ||
Sbjct 28243 GCTTGGCCAGTTCCCCCGGCAGCAGCAGGCGCACGGCTGTCTGTATCTCCCTGGAGGTGA 28184
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||| | |||||||| || |||||| ||||||| |||| |
Sbjct 28183 TGGTCGAGCGCTTGA---AATGCGCCAGGCGCGATGCCTCGCCCGCGATGCGCTCGAAGA 28127
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||| |||| ||||||||||||| ||| | |||| |||||||| |||| |||
Sbjct 28126 TGT---TGACGAACGAGTTCATGATGTCCATGGCCTTGGACGAGATGCCGGTGTCGAGGT 28070
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
| ||||||||||||||||||| | | || ||||||
Sbjct 28069 GGACCTGCTTGAGCACCTTGTGCACGTACACCGAGTA 28033
>seq12172
Length=55910
Score = 96.9 bits (106), Expect = 4e-14
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 31909 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 31968
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||| | | |||| || || |||||| ||||||| |||| |
Sbjct 31969 TGGTCGAGCGCTTGCTGTAATGCGTCAAGCGCGATGCCTCGCCCGCGATGCGCTCGAAGA 32028
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||| | || || || ||||||| ||| | ||| ||||| || ||| ||||
Sbjct 32029 TGTCCGTTACGAAAGAATTCATGATACTCATGGCCTTTGAAGAGATTCCAGTGTCAGGGT 32088
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
| || || || |||||||||||||||
Sbjct 32089 GAACTTGTTTTAGCACCTTGTAGATG 32114
>seq469
Length=333043
Score = 91.5 bits (100), Expect = 2e-12
Identities = 86/110 (78%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| || |||||| | |||||||| | |||| ||| || |||||| | || ||||||
Sbjct 202478 GCTGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTTACATGCAAGACCGTTGCCAAC 202419
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAA 1592295
||||||||||| || | || |||||||| ||||||||||| || |||||
Sbjct 202418 ATGATCAAGGGGAAAACTCCTGAGGAGATTCGCAAGACCTTCAATATCAA 202369
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6099525895228724
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