Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq7134 114 1e-20
seq4400 105 6e-18
seq11706 102 7e-17
seq66 93.3 4e-14
>seq7134
Length=91468
Score = 114 bits (126), Expect = 1e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|| ||||||||||| | |||||| | |||||||| || || || || || || || ||
Sbjct 86300 ACAATGCAGATCTTCGTAAAAACGTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCC 86359
Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820
| ||||| | || | || || ||||||||||| ||||| || || || || ||
Sbjct 86360 AGTGACACCATCGAGAACGTCAAGGGGAAGATCCAAGAAAAAGAGGGCATCCCCCCAGAC 86419
Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880
|| || | |||||||||||||||||||||||||| || | | |||| || ||
Sbjct 86420 CAGCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGACGGCCGCACTCTGTCTGACTAC 86479
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
||||| || || || || || || ||| |||| ||||
Sbjct 86480 AACATCCAGAAAGAGTCCACCCTGCACCTGGTCCTGCG 86517
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | |||||||| || || || || || || || |||
Sbjct 86531 ATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 86590
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| || || || || || || ||
Sbjct 86591 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAG 86650
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||||||||||||||| |||||||| || | | |||| || || |||
Sbjct 86651 CAGAGGTTGATCTTTGCCGGGAAGCAGCTGGAAGACGGCCGCACTCTGTCTGACTACAAC 86710
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|| || ||||| || || || ||| |||| ||||
Sbjct 86711 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCG 86745
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | |||||||| || || || || || || || |||
Sbjct 86759 ATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 86818
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| || || || || || || ||
Sbjct 86819 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAG 86878
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||||||||||||||| |||||||| || | | |||| || || |||
Sbjct 86879 CAGAGGTTGATCTTTGCCGGGAAGCAGCTGGAAGACGGCCGCACTCTGTCTGACTACAAC 86938
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|| || ||||| || || || ||| |||| ||||
Sbjct 86939 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCG 86973
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | |||||||| || || || || || || || |||
Sbjct 86987 ATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 87046
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| || || || || || || ||
Sbjct 87047 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAG 87106
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||||||||||||||||||| || | | |||| || || |||
Sbjct 87107 CAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGACGGCCGCACTCTGTCTGACTACAAC 87166
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|| || || || || || || ||| |||| ||||
Sbjct 87167 ATCCAGAAAGAGTCCACCCTGCACCTGGTCCTGCG 87201
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | |||||||| || || || || || || || |||
Sbjct 87215 ATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 87274
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| || || || || || || || || ||
Sbjct 87275 GACACCATCGAGAATGTCAAGGCCAAGATCCATGATAAGGAGGGCATCCCCCCAGACCAG 87334
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||||||||| |||||||| ||| | | |||| || || |||
Sbjct 87335 CAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGACGCACTCTGTCTGACTACAAC 87394
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || || || || || | |||||||| | || ||| | |||||
Sbjct 87395 ATCCAGAAAGAGTCCACCTTGCACTTGGTCCTCCGCTTGAGGGGAGG 87441
>seq4400
Length=129001
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || || || || || || || || ||| |
Sbjct 40353 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 40412
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || |||||||| || |||||||| || ||||| || ||
Sbjct 40413 GATACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCAGACCAG 40472
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | |||||||| || || |||||||||||| | | | || ||||| |||
Sbjct 40473 CAGAGGCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTCTCCGATTACAAC 40532
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || || || ||||| || ||| ||||| |||| || | || |||
Sbjct 40533 ATCCAGAAAGAGTCGACCCTGCACCTGGTGCTGCGTCTGAGGGGTGGC 40580
Score = 100 bits (110), Expect = 3e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || || || || || || || || ||| |
Sbjct 39897 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 39956
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || |||||||| || |||||||| || |||||||| ||
Sbjct 39957 GATACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCCGACCAG 40016
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | |||||||| || || |||||||||||| | | | || ||||| |||
Sbjct 40017 CAGAGGCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTCTCCGATTACAAC 40076
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || || || ||||| || ||| | |||
Sbjct 40077 ATCCAGAAAGAGTCGACCCTGCACCTCGTG 40106
Score = 100 bits (110), Expect = 3e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || || || || || || || || ||| |
Sbjct 40125 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 40184
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || |||||||| || |||||||| || |||||||| ||
Sbjct 40185 GATACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCCGACCAG 40244
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | |||||||| || || |||||||||||| | | | || ||||| |||
Sbjct 40245 CAGAGGCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTCTCCGATTACAAC 40304
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || || || ||||| || ||| | |||
Sbjct 40305 ATCCAGAAAGAGTCGACCCTGCACCTCGTG 40334
>seq11706
Length=58367
Score = 102 bits (112), Expect = 7e-17
Identities = 145/200 (73%), Gaps = 7/200 (4%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || || ||||| || ||||| || || || || ||||| || ||| ||
Sbjct 34545 GATGCAGATTTTCATGAAAACCCTTACCGGGAAGACCATCACTCTCGAGGTTGAACCCTT 34604
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| ||||| | ||||| || ||| || || || |||||||| ||||| | ||
Sbjct 34605 GGACACAACAGAAATGTAAAAACCAA-GATTCAGGATAAGGAAGGAATTCCTCCTAAACA 34663
Query 24823 ----ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT-GTCAGAT 24877
| | | |||||||||| || || ||||||| ||| || | || | ||| ||
Sbjct 34664 GTGAAGACTGACTGATCTTTGCTGGCAATTAGCTGGAAGATG-GACATACTTTGTCTGAC 34722
Query 24878 TATAACATTCAAAAGGAATC 24897
|| |||||||||||||| ||
Sbjct 34723 TACAACATTCAAAAGGAGTC 34742
>seq66
Length=542294
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || |||||||| || || || || || || || |||
Sbjct 261821 ATGCAGATCTTTGTGAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 261762
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||||||||| || || || || || || || ||
Sbjct 261761 GACACCATCGACAATGTCAAGGCCAAGATCCAAGATAAGGAGGGCATCCCCCCAGACCAG 261702
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAAC-ATGTCAGATTATAA 24882
|| | ||||||||||| ||||| ||| |||| || | || | || ||| || || ||
Sbjct 261701 CAGAGGTTGATCTTTGCTGGGAAGCAGTTGGAAGA-TGGACACACTCTGTTTGACTACAA 261643
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || | | || || | |||||||| | || ||| | |||||
Sbjct 261642 CATCCAGGAAAAGTCCACCTTTCACTTGGTCCTCCGCTTGAGGGGAGG 261595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449375876248160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |