Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_022749.1 Length=39758 Score E Sequences producing significant alignments: (Bits) Value seq58932 109 1e-19 seq60920 84.2 6e-12 >seq58932 Length=406 Score = 109 bits (120), Expect = 1e-19 Identities = 223/331 (67%), Gaps = 3/331 (1%) Strand=Plus/Plus Query 25978 TGAAAGTACCAATAAAGGTTTCTACTTTGCTGTCCTTGAATTTCTCAACAAGCAGATCAC 26037 |||| |||| ||| |||| | | || | || | |||||| ||| | |||||||||| Sbjct 43 TGAATTTACCGATATAGGTCTGGATTTCAGTTTCTTCGAATTTATCAGCCAGCAGATCAC 102 Query 26038 GAAATTCGTTAGCCATTTCTTCCTGCACCGCCTCCAGCTGAATAATGCGCAGAACCAGTA 26097 | ||||| | || |||| |||| || ||| |||||| ||| ||||| ||||| | Sbjct 103 GGAATTCCTGGGCGATTTGCTCCTCCAGTTTTTCCTGCTGAACAATACGCAGTACCAGCA 162 Query 26098 CAGGACGATCGCCA---GTGATAATACTGAGGCGTAATTTAAACGGACGTTCTTTCAGAC 26154 |||| ||| ||| || | || ||| || | ||| | | |||||| ||| Sbjct 163 CAGGTACATCACCACCGGTCAGAACGCTGTAACGCAGTTTGATAGCACGTTCAGACAGTT 222 Query 26155 CTTCAAACGGAACGCATTTAAATTCAAATGCCACTGGCATAATGTCTTTGGTCTTCGCTT 26214 | || | || ||| |||| | ||| | | ||||| | ||| | | ||||||| Sbjct 223 CATCGTATGGTGTGCAGGTAAACTGGAATACTGCAGGCATGACGTCACGGCTTTTCGCTT 282 Query 26215 CGACAGACTCCATCAGGGAGCGTTTGCCGCTGAAGTCATTATCTTCAAAATCAGCGGTCT 26274 | || ||||||| ||||| || ||| ||| ||| | |||||| ||| |||| Sbjct 283 CCACGCTTTCCATCACAGAGCGCTTAGCGCCGAAATCACTGTCTTCATGATCTGCGGAGC 342 Query 26275 GGTTTGCTTCAATCGTGATTTTACGGACAGC 26305 || ||||||| || |||||||| || ||||| Sbjct 343 GGCTTGCTTCGATGGTGATTTTGCGTACAGC 373 >seq60920 Length=372 Score = 84.2 bits (92), Expect = 6e-12 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 26369 CCAGTCTTCAATCCATTCTGCCAGTGACTTCTGGGAGTTACGCTCGCCGTTAACAGACAA 26428 ||| ||| | | ||| ||||||||| ||||||| | ||| |||||||||| || Sbjct 1 CCAATCTCCCAGCCACTCTGCCAGTTCCTTCTGGCCCTGACGGCGGCCGTTAACATTCAG 60 Query 26429 CAGAGCAGAGAACGGTGCTGTCTTTTTCAGTTTGAGTGTGGCGGTGTTATCTGCGTGACC 26488 ||| | | || |||||||||||||||||| | ||||| || || || || || || Sbjct 61 CAGTGATGCAAAAGGTGCTGTCTTTTTCAGTGATACGGTGGCTGTATTGTCAGCATGCCC 120 Query 26489 TGGTTCATCAATAGTACCCAGGTTAAGCACACTGACGGCACGCATATTATCAGCATCGAT 26548 || || | || ||||| | |||| | | | ||| ||| | ||||||||| || Sbjct 121 CGGCTCGCCGATGGTACCGATATTAAAAATAGTTTTAGCAGCCATTTCATCAGCATCAAT 180 Query 26549 AAAGCAGCGGGTGCCTTCATC 26569 ||| |||| | ||||| || Sbjct 181 AAAACAGCTGACACCTTCCTC 201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126963973654080