Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq1881 304 1e-76
seq17588 156 3e-32
seq13417 93.3 3e-13
seq7632 86.0 5e-11
>seq1881
Length=198091
Score = 304 bits (336), Expect = 1e-76
Identities = 975/1502 (65%), Gaps = 23/1502 (2%)
Strand=Plus/Minus
Query 281381 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 281440
||||| ||||| || || || ||| ||| |||||| | |||| ||||| ||
Sbjct 80449 TTAGTGATAGTGATCTTGTTCTCTTTTCCTGTACTCTTATCAACAGCAGAGACATTGAGG 80390
Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500
|| ||||||||||| ||||| ||||||||||| ||||| || || | | ||| ||
Sbjct 80389 ATGCCATTGGCATCAGTGTCAAAAGTGACTTCAATCTGAGGAACACCACGGGGGGCAAGT 80330
Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560
|| || ||| | | || | || || || ||||| | || | | |||
Sbjct 80329 GGTATGCCTGTGAGTTCGAACTTGCCAAGCAGGTTGTTATCCCTGGTCATGGCATGCTCA 80270
Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620
|| || ||| || || || ||| || || || || || || || || |
Sbjct 80269 CCTTCATAAACCTGAATGAGCACACCAGGCTGGTTGTCAGAGTAGGTAGTGAAGGTTTGT 80210
Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680
| | || |||||| ||||| || | | || | ||||| | ||||||||
Sbjct 80209 GTCTGCTTGGTAGGAATGGTTGTATTGCGCTTGATGAGGACTGTCATGACCCCACCAGCA 80150
Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 281740
||||| | |||||| ||||||||||||||||| | || | | || ||||| ||||||
Sbjct 80149 GTTTCAATACCAAGGGAAAGAGGAGTGACATCTAACAGCAGCAAATCTTGAACATTTTCA 80090
Query 281741 TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCA 281800
| | ||| ||||| ||||| || | ||| |||||||| |||||||| ||||||
Sbjct 80089 GATTTGTCTCCAGACAGAATGGCTGCCTGGACAGCTGCACCATAAGCAACAGCCTCATCA 80030
Query 281801 GGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTAC- 281859
|| || | | | ||| |||| ||| |||||||| || | ||||||| ||| |
Sbjct 80029 GGGTTGATGCTCTTATTCAGTTCTTTTCCATTGAAGAAGTCCTGCAGAAGTT-TCTGAAT 79971
Query 281860 CTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAG 281919
||| || || || | || || || |||| ||||| ||||| | ||| || || || ||
Sbjct 79970 CTTGGGGATTCGGGTAGAACCACCTACTAGGACAATATCATGGATCTGGGACTTGTCTAG 79911
Query 281920 TTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACA 281979
|| | |||| | |||| || ||||| || || | | || | ||| | |
Sbjct 79910 CTTAGCATCCTGCAGGGCTTTCTCTACGGGATCCAGGGTGCCACAGAATAGGTCAGCATT 79851
Query 281980 AAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGA 282039
|||||||| || | || | |||| | | || ||||||||||||| | | ||
Sbjct 79850 GAGTTCTTCAAACCTGGCACGGGTAATGGAGGTATAGAAATCAATTCCTTCATAGAGTGA 79791
Query 282040 ATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCAC--GTTCACAT 282097
|||| ||||| | | || || || || |||| ||||||| | || || |
Sbjct 79790 GTCAATCTCAATACTGGCCTGGGTAATGGAGGAGAGTGTGCGTTTAGAAGCAGTACAGAG 79731
Query 282098 GCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGTTTTATATTTTCTC 282157
| | || | || || | || | |||| || | |||| || | |
Sbjct 79730 ACAATGGACAGCCCTC-------TTGTTCTCACTGATG----TCCTTCTTATGCTTGCGC 79682
Query 282158 TTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAAATCTTCACCTCCCAATT 282215
||||| || ||| | ||| | || | || || ||||||||||| || || || |
Sbjct 79681 TTGAACTCGGCAATGAA--ATGGTTGACCATTCGGTTGTCAAAATCTTCTCCACCTAAGT 79624
Query 282216 TAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAA 282275
|| | ||| | |||| | | || | || | ||||||||||| || | | | |
Sbjct 79623 GGGTGTCTCCAGCTGTAGATTTGACCTCAAAGATTCCATCTTCAATAGTGAGGATGGACA 79564
Query 282276 CATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTT 282335
||||| || ||||| || | ||||| ||||| || ||| |||| | ||||
Sbjct 79563 CATCAAAAGTGCCACCTCCTAAGTCAAAGATAAGCACGTTCCTTTCAGCTCCAACCTTTT 79504
Query 282336 TATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAA 282395
| || | ||||| ||| ||||||||||||||| ||||| || || || | ||||| |
Sbjct 79503 TGTCTAAGCCATAAGCAGTAGCAGCAGCAGTTGGCTCATTGATGATCCTGAGTACATTGA 79444
Query 282396 GACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAG 282455
|||||||||| |||| |||||||| || || || || || || || ||||| ||||
Sbjct 79443 GACCAGCAATAGTTCCAGCATCTTTGGTTGCCTGATGCTGAGAGTCATTGAAATAAGCAG 79384
Query 282456 GAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCA 282515
| ||||| | ||| |||| || || || || | |||||| ||| ||| ||||
Sbjct 79383 GTACAGTGACAACAGCATTGGTAACAGTCTTCCCTAGATAAGCTTCTGCAATTTCCTTCA 79324
Query 282516 TTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGA-ATATTGCTTGGATTCATTTTGA 282574
|||| | |||| ||| ||||| | | |||||| | | | | ||| | |||
Sbjct 79323 TTTTTGTCAAAACCATAGATGACACCTCCTCTGGATAGAAACTTTTTGTCTCTCCCTTG- 79265
Query 282575 TATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTTC 282634
||| |||| | | || | || |||| | || | || ||||||| |||
Sbjct 79264 TATTCCACTTGGACCTTGGGCCTGCCTGCATCATTCACCACCATGAAGGGCCAATGCTTC 79205
Query 282635 ATATCTGATTGAACACTTTGGTCATTAAAATCT-CTACCAATTAATCGTTTTGCATCAAA 282693
||||||||||| ||| ||| | |||||| | || || | || || ||||||||
Sbjct 79204 ATATCTGATTGGACAACAGCATCA-TCAAATCTACGTCCTATAAGACGCTTGGCATCAAA 79146
Query 282694 AATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTC 282753
|| || || || || || | |||| |||| | || || ||||| || |||| |||
Sbjct 79145 AACCGTGTTAGTGGGGTTCATTGCAACTTGGTTCTTTGCAGCATCACCGATCAATCATTC 79086
Query 282754 TGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAAT 282813
|| || ||||| | |||||| ||| || || || || || |||||||| ||||| ||
Sbjct 79085 GGTATCAGTAAAGGCAACATAACTTGGGGTGGTTCGGTTTCCCTGATCATTGGCAATTAT 79026
Query 282814 TTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACC 282873
||| ||||| || | || | ||||| |||||| | || || || | |||||| ||
Sbjct 79025 TTCCACTTTCCCGTGCTGGAAGACACCCACACAAGAGTAGGTGGTGCCAAGATCAATGCC 78966
Query 282874 AA 282875
||
Sbjct 78965 AA 78964
>seq17588
Length=70272
Score = 156 bits (172), Expect = 3e-32
Identities = 199/270 (74%), Gaps = 7/270 (3%)
Strand=Plus/Plus
Query 282284 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGA 282343
|| |||||||| | ||||| | | || ||||| |||| ||| | |||| |||| |
Sbjct 32585 GTACCACCACCAAGGTCAAACACAGCAACCTTCATCTCTTGATCT--GATTTT-TCAACA 32641
Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403
|| || |||| |||||||||||| ||||| |||||||| | || | |||||| |||
Sbjct 32642 CCGTAAGCAAGAGCAGCAGCAGTAGGTTCGTTAATAATACGTTTCACCTCAAGACCTGCA 32701
Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463
||| || || ||||| || ||||| | |||||| || |||||||||||||| |||
Sbjct 32702 ATTTGACCAGCCTCTTTTGTAGCTTGACGTTGTGAGTCTGAGAAATATGCAGGAACTGTA 32761
Query 282464 ATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTT 282523
|| || || ||||||||||||| ||| | ||| | ||| ||||| |||||||| ||
Sbjct 32762 ATTACAGCCTCTGTTACTTCTTGTCCTAAATAGTCTTCTGCAGTTTGCTTCATTTT--TT 32819
Query 282524 AAA--ATCATTGATGAAATTTGTTCTGGAG 282551
|| | ||||| |||| || || |||||
Sbjct 32820 GAAGTACCATTGCAGAAAGTTCTTGTGGAG 32849
Score = 123 bits (136), Expect = 2e-22
Identities = 322/491 (66%), Gaps = 15/491 (3%)
Strand=Plus/Plus
Query 281410 TGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGAC 281469
||| | |||||| |||| ||| | | ||||| || ||||| | |||||| | ||
Sbjct 31711 TGTCGCTTTATCTTTCGCAGAAACACTCAAGATACCGTTAGCATCAATATCAAAACTTAC 31770
Query 281470 TTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAG 281529
|||||||||||| | || | ||| ||||| | || ||| | || || | || |
Sbjct 31771 TTCAATTTGAGGAATACCACGCTGTGCAGGAGCAATACCTGTTAGGTTGAAATTACCAAT 31830
Query 281530 ATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGT 281589
| | ||||| | || | | | || |||||| | | | || || || || | ||
Sbjct 31831 AGTTTTATTTTGGTTGGCCATTGGTCTTTCACCTTGAAGCACATGAATTGTTACCTCTGT 31890
Query 281590 TTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCT 281649
||| ||||||| |||| || | | ||| ||||||||||| || |||||
Sbjct 31891 TTGGTTATCTGCCGCTGTTGAGAAAGTTTCAGCTTTCTTACAAGGAATAGTAGTGTTAGC 31950
Query 281650 ATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGAC 281709
|||||||| || ||||| | |||||| ||| || | ||| | ||||||||||| ||
Sbjct 31951 ATCAATAAGTTTAGTCATTACACCACCTAGTGTCTCAATACCTAATGAAAGAGGAGTTAC 32010
Query 281710 ATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTG 281769
||| | ||| |||| | || || |||| |||||| | || ||| ||||
Sbjct 32011 ATCTAATAGAACAACACCTTTAA---TTTCGTCAGTT---------AAAACAGCACCTTG 32058
Query 281770 AATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACC 281829
| ||||||||| | ||||| | ||||| || |||||| || | | ||||||
Sbjct 32059 TACAGCAGCACCTAAAGCAACTACCTCATCTGGGTTAACACCTTTAGAAGGAGCTTTACC 32118
Query 281830 ATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAA 281889
| || || | | | || || | ||| ||||||||||| ||| || ||||||||
Sbjct 32119 A---AAGAAGTCTTCTACAACTTTTTGTACAGCAGGAATACGAGTTGAACCACCAACTAA 32175
Query 281890 TACAATTTCAT 281900
| | |||||
Sbjct 32176 GATTACTTCAT 32186
>seq13417
Length=55113
Score = 93.3 bits (102), Expect = 3e-13
Identities = 206/307 (67%), Gaps = 18/307 (6%)
Strand=Plus/Plus
Query 281265 TTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTTCTTGTTATCTGCTTCTTCAAATT 281324
|||| ||||||||| ||| ||||| | || ||| || ||| | || |||| |
Sbjct 18447 TTTCCAATTCATTTCTAGTATCAATGCGTTCCTTGAGCTTTTTGTCTTCCTCGGCAAACT 18506
Query 281325 CTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATT----- 281379
| ||| || ||| ||| || ||||||| |||||| | || ||||||
Sbjct 18507 TCTCAGCATCATTAACCATCCTTTCAATTT---CTTCAGG---TGTTAGGCGATTTTGGT 18560
Query 281380 -ATTAGTAATAGTAATATTCTTGGATTTGTT---TGTTGATTTATCAGCGGCAGTCACAT 281435
||| ||||| || || || || |||||| ||| ||| || | || |||||
Sbjct 18561 CATTGGTAATGGTGATCTTATT---TTTGTTGCCTGTACCTTTGTCTTCAGCCGTCACGC 18617
Query 281436 TAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAG 281495
|||||| ||||| |||| | ||||| ||||||||||| || || ||||| | |||
Sbjct 18618 GAAGAATGCCATTCACATCTATCTCAAAGGTGACTTCAATCTGTGGAACCCCACGAGGAG 18677
Query 281496 CAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTC 281555
|||| || || || || || ||| ||||||||| | ||| ||||| || | ||
Sbjct 18678 CAGGAGGAATTCCCGTCAGATCAAAAGTTCCCAGAAGGTGATTGTCTTTCGTCAGGGGTC 18737
Query 281556 GTTCACC 281562
|||||||
Sbjct 18738 GTTCACC 18744
>seq7632
Length=204648
Score = 86.0 bits (94), Expect = 5e-11
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 131181 TAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCATT 131240
|||| || ||||| ||||| ||||| ||||||||| | || || | || |||||||
Sbjct 83677 TAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCGCAAAGTCATTCATT 83736
Query 131241 ACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGATG 131300
| || ||||| ||| | || ||| || || || || ||||||||||| || |||||||
Sbjct 83737 ATGGTGCTCCTAAGGAAATGGAATCATACTACCAGGAGATTGGTAGAGCTGGCCGTGATG 83796
Query 131301 GA 131302
||
Sbjct 83797 GA 83798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3736075686854472
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