Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_023693.1 Length=148612 Score E Sequences producing significant alignments: (Bits) Value seq13469 98.7 9e-16 >seq13469 Length=49334 Score = 98.7 bits (108), Expect = 9e-16 Identities = 226/338 (67%), Gaps = 8/338 (2%) Strand=Plus/Plus Query 26454 AGAATAAATTATCACCTAGCACAAGTGCTACAGA-ATCTTCA---CCAATAAAGTTCTCA 26509 |||| | ||||||||||| || || ||||| ||| ||| |||||||| | || Sbjct 39924 AGAAAATATTATCACCTAAAACTAG----ACAGACATCATCATTCCCAATAAACTCTTCG 39979 Query 26510 CCAATAATAAACGCTTCTGCTAAACCTTTTGGGCTATCCTGTATTGCATACTGTAGGGAA 26569 ||||||||||| || | ||| || || | ||| |||| ||||| | | Sbjct 39980 CCAATAATAAAGGCCTGTGCCAACCCATCTGGAGAGGGCTGTTCGGCATAAGACAACTCA 40039 Query 26570 ATACCAAAAGAAGAACCATCACCTAGAAGATTTACAAAATTAATTTGATCTTCTGGTGTT 26629 || ||| || || ||||| |||| ||| || ||| || | ||| || || || Sbjct 40040 ATTCCATAATCGGAGCCATCGCCTAAAAGCCTTTTAAAGCTAGGTAAATCGTCGGGGGTA 40099 Query 26630 GTAATTATTAGTATTTCCCTAATTCCAGAAAGCATTAGGACAGAGAGTGGATAATAAATC 26689 | || |||| || || |||||||| | | |||||| ||||| || || ||||| ||| Sbjct 40100 GATATGATTAAAATCTCTCTAATTCCTGCTAACATTAGTACAGATAGAGGGTAATATATC 40159 Query 26690 ATAGGTTTATCGTAAATTGGTAATAGTTGTTTACTAACCCCTTTAGTAACTGGGTAAAGC 26749 || |||||||| | | || | || || ||||| || ||||| || | ||||| | Sbjct 40160 ATCGGTTTATCAAACACCGGCAGAAGCTGCTTACTTACTCCTTTTGTTATAGGGTATAAA 40219 Query 26750 CTTGTTCCACTACCACCTGCTAAGATAATACCTTTCAT 26787 | ||| || || ||||| | | ||| |||||||| Sbjct 40220 CGTGTACCCGATCCGCCTGCAAGTACAATTCCTTTCAT 40257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474879067136640