Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq4400 149 6e-31
seq7134 129 6e-25
seq2665 82.4 7e-11
>seq4400
Length=129001
Score = 149 bits (164), Expect = 6e-31
Identities = 154/199 (77%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| ||||||||||| || ||||||||| | ||| | | | ||||| ||||||||||
Sbjct 40094 GGTCGACTCTTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCA-TCCTCCAGCTGCTTGC 40036
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | ||||||| |||||||||||||||||||||||| || || |||||| ||
Sbjct 40035 CAGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTATCCTGGATCTTGGCCT 39976
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||| | || ||| |||||||||| || | ||||| ||| |||||||| || |
Sbjct 39975 TCACGTTCTCGATGGTATCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGG 39916
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 39915 TCTTCACGAAGATCTGCAT 39897
Score = 149 bits (164), Expect = 6e-31
Identities = 154/199 (77%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| ||||||||||| || ||||||||| | ||| | | | ||||| ||||||||||
Sbjct 40322 GGTCGACTCTTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCA-TCCTCCAGCTGCTTGC 40264
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | ||||||| |||||||||||||||||||||||| || || |||||| ||
Sbjct 40263 CAGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTATCCTGGATCTTGGCCT 40204
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||| | || ||| |||||||||| || | ||||| ||| |||||||| || |
Sbjct 40203 TCACGTTCTCGATGGTATCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGG 40144
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 40143 TCTTCACGAAGATCTGCAT 40125
Score = 145 bits (160), Expect = 7e-30
Identities = 153/199 (77%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| ||||||||||| || ||||||||| | ||| | | | ||||| ||||||||||
Sbjct 40550 GGTCGACTCTTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCA-TCCTCCAGCTGCTTGC 40492
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | ||||||| ||||||||| |||||||||||||| || || |||||| ||
Sbjct 40491 CAGCAAAGATGAGCCTCTGCTGGTCTGGAGGGATGCCTTCTTTATCCTGGATCTTGGCCT 40432
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||| | || ||| |||||||||| || | ||||| ||| |||||||| || |
Sbjct 40431 TCACGTTCTCGATGGTATCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGG 40372
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 40371 TCTTCACGAAGATCTGCAT 40353
>seq7134
Length=91468
Score = 129 bits (142), Expect = 6e-25
Identities = 155/208 (75%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||||||||||||||| || ||||| || || ||| | | | || || ||
Sbjct 87420 AAGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGTCCA-TCTTCCAG 87362
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||| || || | || |||| ||||||||| || |||||||| ||||| || |||
Sbjct 87361 CTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCATGGAT 87302
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||||| | ||| | ||||| |||||||||| || | ||||| ||| || ||
Sbjct 87301 CTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACC 87242
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661
||||| || || ||||| |||||||||
Sbjct 87241 GGTCAAGGTCTTCACGAAGATCTGCATG 87214
Score = 125 bits (138), Expect = 7e-24
Identities = 147/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||||||||| || ||||| || || ||| ||| || ||||| || ||
Sbjct 87184 GGTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCGTCTTCCAGCTGTTTCCC 87125
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || | || ||||||||| || |||||||| |||||||| |||||| |||
Sbjct 87124 GGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTT 87065
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||| | ||||| |||||||||| || | ||||| ||| || ||||||| ||
Sbjct 87064 GACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAAGGT 87005
Query 133643 TTTTACGAAAATCTGCATG 133661
|| ||||| |||||||||
Sbjct 87004 CTTCACGAAGATCTGCATG 86986
Score = 123 bits (136), Expect = 2e-23
Identities = 146/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||||||||| || ||||| || || ||| ||| || ||||| || ||
Sbjct 86500 GGTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCGTCTTCCAGCTGTTTCCC 86441
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || | || ||||||||| || |||||||| || || || |||||| |||
Sbjct 86440 GGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCTTTTTCTTGGATCTTCCCCTT 86381
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||| | ||||| |||||||||| || | ||||| ||| || ||||||| ||
Sbjct 86380 GACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAACGT 86321
Query 133643 TTTTACGAAAATCTGCAT 133660
||||||||| ||||||||
Sbjct 86320 TTTTACGAAGATCTGCAT 86303
>seq2665
Length=168205
Score = 82.4 bits (90), Expect = 7e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 148866 TACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTG 148925
|||||||| || || | |||||| ||||||||||||||| |||| ||||| || |||
Sbjct 87838 TACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCTGCTGGTTG 87897
Query 148926 CTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGG 148963
||||| | || || | || ||||| |||||||||||
Sbjct 87898 CTCTTCCGATTACAGGAATCTTTGTAAAGCATGTACGG 87935
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482860201069280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |