Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_025447.1 Length=348532 Score E Sequences producing significant alignments: (Bits) Value seq25394 123 6e-23 >seq25394 Length=23467 Score = 123 bits (136), Expect = 6e-23 Identities = 218/308 (71%), Gaps = 21/308 (7%) Strand=Plus/Minus Query 299049 GCTGGTACTAAGTATCGTGGTGAATTTGAAGAACGCATCGACAATTTGCTA--AAAGAAC 299106 |||||||| || || ||||| | |||||||| || || ||||| | || || |||| Sbjct 11906 GCTGGTACAAAATACCGTGGCCAGTTTGAAGAGCGAAT--ACAATCTATTATCAACGAAC 11849 Query 299107 TAAAGAAA---CGTGAAAATACTATTGTTTTCATTGATGAAATTCATATTATGGTTGGGG 299163 |||| ||| | ||| || ||| | ||||| || |||||||||| | ||||| | Sbjct 11848 TAAACAAAAACCCTGATG-TA--ATTATATTCATCGACGAAATTCATACACTAGTTGGTG 11792 Query 299164 CTGGTTCCGCAAGTAATGGTTCTATGGACATGAGCAATATGCTTAAGCCAGCACTTTCAC 299223 | ||||| || | |||||| ||||| | |||||| | || || || || ||| Sbjct 11791 CAGGTTCTGC---TGCTGGTTCAATGGATGCGGCCAATATTTTAAAACCTGCTCTGGCAC 11735 Query 299224 GTGGTGAGATTCG-TGTAATTGGTGCAACAACATATGATGAATATCGTAAAAATATCGAG 299282 | || ||||| | |||| ||||||||||||||| || || |||||||| | ||| || Sbjct 11734 GAGGAGAGATCCAATGTA-TTGGTGCAACAACATTAGACGAGTATCGTAATAGTATAGAA 11676 Query 299283 AAAGATAGTGCATTAACTCGTCGTTTTATGAAAATTGACGTAGTTGAGCCGACAA---TT 299339 |||||| | || ||| |||||||| ||||||| |||| || || |||| | Sbjct 11675 AAAGATGGAGCTTTAGAGCGTCGTTTCCAGAAAATT---CTAGTAGAACCTACAACTGTA 11619 Query 299340 GATGAAAC 299347 |||||||| Sbjct 11618 GATGAAAC 11611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1113845661510868