Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_025460.1 Length=42600 Score E Sequences producing significant alignments: (Bits) Value seq57556 87.8 5e-13 >seq57556 Length=433 Score = 87.8 bits (96), Expect = 5e-13 Identities = 139/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 5001 TATTCGCTGACTCAGTAGCTGGTAGCGACAATTCAATACTCGTCGGAGAGCTTGCGAAAA 5060 |||| |||| ||||| | || | || ||||||| || | |||| | || | | Sbjct 339 TATTTACTGATGCAGTAACAGGAACTGAAGATTCAATTCTTATAAGAGAATTAGCAACTA 280 Query 5061 TACTTAAACAAAACGGTGTGGATATAGGACAAAACAGATTATTCAAATGGTTAAGAAATA 5120 || | || ||||| || || ||||||||| |||| ||| ||||||||||| | || | | Sbjct 279 TATTAAATCAAAAAGGAGTTGATATAGGAGAAAAGAGACTATTCAAATGGATGAGGGAAA 220 Query 5121 ATGGATATCTCATTAAAA-AGAGTGGAGAAAGTTATAACTTACCAACTCAAAAGAGTATG 5179 |||| ||| | || |||| ||| ||| | | | |||||||| |||||||| ||| Sbjct 219 ATGGGTATTTAATCAAAAGAGA-TGGTATAGATAAGAACTTACCTACTCAAAAATCCATG 161 Query 5180 GATCTAAAAATCTTGGA 5196 ||||| ||| | |||| Sbjct 160 GATCTTAAATTAATGGA 144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136048354649168