Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq5908 100 9e-18
seq7134 98.7 3e-17
seq4431 98.7 3e-17
seq3891 95.1 4e-16
seq4499 86.0 2e-13
>seq5908
Length=105562
Score = 100 bits (110), Expect = 9e-18
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 12010 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 12069
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 12070 CCCGGGTTTCGGC 12082
>seq7134
Length=91468
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 77135 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 77194
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 77195 CCGGGTTTCGGC 77206
>seq4431
Length=128442
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 43052 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 43111
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 43112 CCGGGTTTCGGC 43123
>seq3891
Length=157262
Score = 95.1 bits (104), Expect = 4e-16
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||| ||||||||| | |
Sbjct 135423 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGCCCCTGGTTCGATC 135482
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 135483 CCGGGTTTCGGC 135494
>seq4499
Length=171354
Score = 86.0 bits (94), Expect = 2e-13
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand=Plus/Minus
Query 2760 GTGTTTA--TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCC 2817
||||||| | ||||| |||||||||||||| ||||||||||||||||||| |||||||
Sbjct 147865 GTGTTTAACTCACTGAAATAGCTCAGTTGGGAAAGCATTAGACTGAAGATCTGAAGGTCC 147806
Query 2818 CTGGTT 2823
||||||
Sbjct 147805 CTGGTT 147800
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15833517509940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |