Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq6821 176 6e-38
seq3668 176 6e-38
seq9072 167 3e-35
seq14472 149 9e-30
seq16765 143 4e-28
seq6787 134 2e-25
seq12172 116 5e-20
>seq6821
Length=94590
Score = 176 bits (194), Expect = 6e-38
Identities = 177/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| |||| |||| || ||| |||||
Sbjct 84794 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCTAAGGCCATG 84847
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 84848 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCCCGC 84907
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| ||| ||| | || ||||||||||| |||||||||
Sbjct 84908 CTGGCGCATTACAACAAGCGCTCCACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 84967
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| |||||| ||||||| ||| ||||| |||||||||||||
Sbjct 84968 CTGCTGCTGCCCGGCGAGCTGGCCAAGCATGCCGTGTCCGAGGGCACCA 85016
Score = 149 bits (164), Expect = 9e-30
Identities = 171/229 (75%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||| |||||||| |||| ||| || ||| |||||
Sbjct 33810 TACAAGGTGCTGAAGCAAGTGCACCCGGACACCGG-----CATT-TCGTCTAAGGCCATG 33863
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| || |||| |||||| |||
Sbjct 33864 GGCATCATGAACTCATTCGTCAACGACATCTTCGAGCGTATCGCGGGCGAGGCGTCCCGC 33923
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| ||| ||| | || ||||||||||| |||||||||
Sbjct 33924 CTGGCGCATTACAACAAGCGCTCCACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 33983
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||||| ||||||| ||| ||||| |||||||||||||
Sbjct 33984 CTGCTGCTGCCTGGCGAGCTGGCCAAGCATGCCGTGTCCGAGGGCACCA 34032
>seq3668
Length=142850
Score = 176 bits (194), Expect = 6e-38
Identities = 176/227 (78%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|||||||||||||||||||| |||||| |||| |||| || |||| |||||
Sbjct 98847 TACAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 98794
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||||||||||||||| |||| ||||||| |||||| |||
Sbjct 98793 GGCATCATGAACTCGTTTGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 98734
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | | ||||||||||| |||||||||
Sbjct 98733 CTGGCGCATTACAACAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACGGCCGTGCGC 98674
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
||| | ||| ||| || ||||||| ||||||||| |||||||||||
Sbjct 98673 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCAC 98627
Score = 158 bits (174), Expect = 2e-32
Identities = 174/229 (76%), Gaps = 7/229 (3%)
Strand=Plus/Plus
Query 724915 ACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGT 724974
||| ||||||||||||||| |||||| |||| |||| || |||| |||||
Sbjct 95128 ACACGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTTCAAGGCCATGG 95181
Query 724975 CGATCATGAACTCGTTTG-TCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||| ||||||| |||||||||| |||| ||||||| |||||| |||
Sbjct 95182 GCATCATGATCTCGTTTCCTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 95241
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | | ||||||||||| |||||||||
Sbjct 95242 CTGGCGCTTTACAACAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACGGCCGTGCGC 95301
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 95302 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 95350
Score = 149 bits (164), Expect = 9e-30
Identities = 171/229 (75%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|| ||||||||||||||||| |||||| |||| |||| || |||| | |||
Sbjct 109727 TATAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCTATG 109674
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|| ||||||||||| |||||||| || |||| ||||||| |||||| |||
Sbjct 109673 GGCATTATGAACTCGTTCGTCAACGATATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 109614
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||| | | |||||||||| || ||| | | | ||||||||||| |||||||||
Sbjct 109613 CTGGCTCATTACAACAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACGGCCGTGCGC 109554
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||| ||||| |||||||||||||
Sbjct 109553 CTGCTGCTGCCCGGGGAGCTGGCCAAGCATGCCGTGTCCGAGGGCACCA 109505
Score = 116 bits (128), Expect = 5e-20
Identities = 124/164 (76%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 724979 CATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGC 725038
|||||||||||| ||||||||||| || | ||||||| ||| || ||||||||
Sbjct 80984 CATGAACTCGTTCGTCAACGACATCTTCAAGCGCATCGTGGGCGATGCGTCGCGCCTGGC 81043
Query 725039 GCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGAT 725098
| | ||| |||||| || ||| | | |||||| || ||| |||||||||||| |
Sbjct 81044 GTATTACAATAAGCGCGCGACCATCACCTCCAGCGAGACCCGGACGGCCGTGCGCCTGCT 81103
Query 725099 CATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| ||| || ||||||| ||||||||| |||||| ||||||
Sbjct 81104 GCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGAGCACCA 81147
>seq9072
Length=74950
Score = 167 bits (184), Expect = 3e-35
Identities = 176/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|||||||||||||||||||| |||||| || ||| |||| || |||| |||||
Sbjct 15648 TACAAGGTGCTCAAGCAGGTCCACCCCGACAC---TGG--CATC-TCGTCCAAGGCCATG 15595
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||| ||||| |||| ||||||| |||||| |||
Sbjct 15594 GGCATCATGAACTCGTTCGTCAAAGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 15535
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | | ||||||||||| |||||||||
Sbjct 15534 CTGGCGCATTACAACAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACGGCCGTGCGC 15475
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || |||||| ||||||||| |||||||||||||
Sbjct 15474 CTGCTGCTGCCCGGGGAGTTGGCCAAGCACGCCGTGTCCGAGGGCACCA 15426
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|||||||||||||||||||| |||||| |||| |||| || |||| |||||
Sbjct 37887 TACAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 37940
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 37941 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 38000
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | ||||||||| || ||| | | | ||||||||||| |||||||||
Sbjct 38001 CTGGCGCATTATAACAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACGGCCGTGCGC 38060
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||| || |||||||||||||
Sbjct 38061 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCTGTGTCCGAGGGCACCA 38109
>seq14472
Length=45083
Score = 149 bits (164), Expect = 9e-30
Identities = 170/227 (75%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|| || |||||||||||||| |||||| |||| |||| || |||| |||||
Sbjct 5424 TATAAAGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 5371
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 5370 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAACGCATCGCGGGCGAGGCGTCGCGC 5311
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||| | | |||||| ||| || ||| | | | ||||||||||| |||||||||
Sbjct 5310 CTGGCTCATTACAACAAACGCTCGACCATCACCTCCAGGGAGATCCAGACGGCCGTGCGC 5251
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
||| | ||| ||| || ||||||| ||||||||| |||||||| ||
Sbjct 5250 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGTAC 5204
Score = 134 bits (148), Expect = 2e-25
Identities = 168/229 (73%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|||||||| ||||||||||| ||||| |||| |||| || ||| |||||
Sbjct 24609 TACAAGGTACTCAAGCAGGTCCACCCGGACACCGG-----CATC-TCGTCCAAAGCCATG 24556
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|| |||||||| || ||||||||||| |||| ||||||| |||||| |||
Sbjct 24555 GGCATTATGAACTCATTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 24496
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||| | | |||||||||| || ||| | | | ||||||||||| |||||||||
Sbjct 24495 CTGGCTCATTACAACAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACAGCCGTGCGC 24436
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | | | ||| |||||||||| ||| || || || ||||||||||
Sbjct 24435 CTGCTGCTCCCCGGAGAACTGGCCAAGCATGCGGTGTCTGAGGGCACCA 24387
>seq16765
Length=36855
Score = 143 bits (158), Expect = 4e-28
Identities = 172/231 (74%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971
|||| || ||||| |||||||| ||||| || ||| |||| || ||| |||
Sbjct 11783 TCTATAAAGTGCTGAAGCAGGTCCACCCTGACAC---TGG--CATC-TCGTCGAAGGCCA 11730
Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031
|| |||||||||||||| |||||||||| |||| ||||| | |||||| |
Sbjct 11729 TGGGCATCATGAACTCGTTCATCAACGACATCTTCGAGCGCATGGCGGGCGAGGCGTCGC 11670
Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091
||||||| | | |||||||||| || ||| | | | ||||||||||| |||||||
Sbjct 11669 GCCTGGCCCATTACAACAAGCGCTCTACCATCACCTCCAGAGAGATCCAGACGGCCGTGC 11610
Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 11609 GCCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 11559
>seq6787
Length=94921
Score = 134 bits (148), Expect = 2e-25
Identities = 168/228 (74%), Gaps = 12/228 (5%)
Strand=Plus/Plus
Query 724915 ACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGT 724974
||||||||||||||||||| |||| | |||| |||| || |||| |||||
Sbjct 28049 ACAAGGTGCTCAAGCAGGTCCACCTCGACACCGG-----CATC-TCGTCCAAGGCCATGG 28102
Query 724975 CGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCC 725034
|||||||||||||| |||||| || |||| ||||||| |||||| ||||
Sbjct 28103 ACATCATGAACTCGTTCGTCAAC---ATCTTCGAGCGCATCGCGGGCGAGGCATCGCGCC 28159
Query 725035 TGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCC 725094
|||||| | ||| |||| || ||| | | | ||||| ||||| ||||||||||
Sbjct 28160 TGGCGCATTTCAA---GCGCTCGACCATCACCTCCAGGGAGATACAGACAGCCGTGCGCC 28216
Query 725095 TGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | ||| || |||||||||| ||||||||| |||||||||||||
Sbjct 28217 TGCTGCTGCCGGGGGAACTGGCCAAGCACGCCGTGTCCGAGGGCACCA 28264
>seq12172
Length=55910
Score = 116 bits (128), Expect = 5e-20
Identities = 168/233 (72%), Gaps = 8/233 (3%)
Strand=Plus/Minus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATC-CTCCAACAAGTC 724969
|||||||||||||| || || || ||||| || ||| ||| || ||| || |
Sbjct 32113 ATCTACAAGGTGCTAAAACAAGTTCACCCTGACAC---TGGA--ATCTCTTCAA--AGGC 32061
Query 724970 CATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGG 725029
|||| |||||||| || || || | ||||| |||| ||||||| ||||||
Sbjct 32060 CATGAGTATCATGAATTCTTTCGTAACGGACATCTTCGAGCGCATCGCGGGCGAGGCATC 32001
Query 725030 TCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGT 725089
||| || ||| | || ||||||| || ||| | | | ||||||||||| |||||
Sbjct 32000 GCGCTTGACGCATTACAGCAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACGGCCGT 31941
Query 725090 GCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||||||| | ||| ||| || ||||||| ||||||||| || ||||||||||
Sbjct 31940 GCGCCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCTGAGGGCACCA 31888
Score = 107 bits (118), Expect = 3e-17
Identities = 168/230 (73%), Gaps = 14/230 (6%)
Strand=Plus/Plus
Query 724915 ACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGT 724974
|||| |||| | |||||| |||||| || || ||| |||| || |||| || ||
Sbjct 23645 ACAAAATGCTGAGGCAGGTCCACCCC-GACCC--TGG--CATC-TCGTCCAAGGCCGTGG 23698
Query 724975 CGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC--G 725032
||| |||||||||| ||||||||||| |||| |||||| |||||| ||| |
Sbjct 23699 GCATCGTGAACTCGTTCGTCAACGACATCTTCGAGCGCATCACAGGCGAGGC--GTCGTG 23756
Query 725033 CCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCG 725092
||||||||| |||||||| | | ||| | | | |||| || ||| ||||||||
Sbjct 23757 CCTGGCGCGTCGCAACAAGCTC--GGCCATCCCCTCCAGGGAGA-CCCGACGGCCGTGCG 23813
Query 725093 CCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | | ||| ||| || ||||||| |||| |||| |||||||||||||
Sbjct 23814 CCCGCTGCTGCCCGGGGAGCTGGCCAAGCAC-CCGTGTCCGAGGGCACCA 23862
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7168863170085064
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