Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq1509 91.5 2e-13 >seq1509 Length=219255 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 213996 AGATTATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTTT 214055 |||| |||| || || | || ||||| || ||||| || | | || | ||| | | Sbjct 162636 AGATAGTTGATGGAGAGATGTATCCTCCCACAGTCAAAGATACTCAGGTCAAGATGATCT 162695 Query 214056 ACGAACCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTCG 214115 || || ||| || ||| | | | || || |||| | ||| | ||||| || | Sbjct 162696 ACCCGCCTCACGTCCCTGAACATCTGCAGTTTGCTGTGGGCCAGGAGGTCTTTGGCCTGG 162755 Query 214116 TGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGACG 214175 |||| ||| | ||| |||| |||| || ||||| | || || ||||| || || || | Sbjct 162756 TGCCTGGTCTGATGATGTATGCCACAATTTGGCTTCGGGAACATAACAGAGTATGTGATG 162815 Query 214176 TGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGA 214223 | || ||||||||||| || |||||| |||| || ||| | ||||||| Sbjct 162816 TACTTAAACAAGAGCATCCAGAATGGGACGATGAGCAGTTATTCCAGA 162863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 722501977841280