Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_027335.1 Length=145518 Score E Sequences producing significant alignments: (Bits) Value seq81620 105 6e-18 >seq81620 Length=227 Score = 105 bits (116), Expect = 6e-18 Identities = 157/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 108759 AACGATGTTAATGATTGGGCAAAGCTCTCTGATATGGAGCAAGATTTAATAAATAAAGTG 108818 |||||| | |||| ||| ||||| || ||| || |||||||| | |||||| Sbjct 5 AACGATTTGGATGACTGGCGCAAGCTTTCCGATCAAGAAAAAGATTTAGTCGGTAAAGTT 64 Query 108819 TTTGGTGGGTTAACATTACTAGACACAGTTCAATCAGAATCGGGGGTACACTCACTACTT 108878 |||||||| |||| ||||| || || | ||||| ||| | || || | | | | Sbjct 65 TTTGGTGGTCTAACCTTACTTGATACTATGCAATCCGAAACAGGTGTTGAGGCTATCCGA 124 Query 108879 GATGATGTAAGAACACAGCATGAAGAAGCTGTTTTAAATAACATAGCCTTTATGGAAGCA 108938 | ||| | ||||| | |||||||||||||||||||||||||| ||||||||| | Sbjct 125 GCGGATATTAGAACTCCTCATGAAGAAGCTGTTTTAAATAACATTCAGTTTATGGAATCT 184 Query 108939 GTACACGCTAAAAGTTATTCAACAATTTTTAGCACATTTAATA 108981 || || |||||| || || ||||||| ||||| |||| Sbjct 185 GTTCATGCTAAATCCTACTCTTCAATTTTCTCAACATTGAATA 227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 464989748599360