Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq34498 102 9e-17
seq4146 100 3e-16
seq351 100 3e-16
>seq34498
Length=9444
Score = 102 bits (112), Expect = 9e-17
Identities = 160/225 (71%), Gaps = 8/225 (4%)
Strand=Plus/Plus
Query 124671 GTAATCTTGCGCGTCACAAA---CTCGGAACCGCGTCGCTCAGACTCGTGGTTGAACAGA 124727
|| || || ||||| ||||| |||| || | || ||| |||||||| ||||||
Sbjct 8215 GTTATTTTACGCGTTACAAAAGTCTCG---CCCCTCCGTTCACTTTCGTGGTTAAACAGA 8271
Query 124728 ATGCCAGTACAC-GCAAACATCCCGTACGACTCGCGGTAGTTTTTCGTCATCCAATACCC 124786
|| ||| | ||| |||||||||||||| ||| ||||||||||| || |||||| | ||
Sbjct 8272 ATACCATT-CACAGCAAACATCCCGTAACTCTCTCGGTAGTTTTTAGTAATCCAAAAACC 8330
Query 124787 AAAGAGCTTGGACACGCCATAGGGGCTTCGGGGGTAGAATGGGGTGTTTTCATTTTGGGT 124846
| | |||| | ||| ||||||| ||||| || || ||||| ||||| | || |
Sbjct 8331 ATACTGCTTCGCCACAGCATAGGGAGAACGGGGATAAAAAGGGGTAGTTTCACTCTGTGG 8390
Query 124847 AGGTTGCTGAATCTTCCCAAACATCTCCGAAGTACCCGCCTGATA 124891
| ||| | ||| ||| ||| |||||| ||| ||||| ||
Sbjct 8391 CACCTCCTGCACCTTACCATACAGCTCCGATGTAGAGGCCTGGTA 8435
>seq4146
Length=133219
Score = 100 bits (110), Expect = 3e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088
||||| || || || | |||||| ||||| |||||||| ||||| |||||||||||
Sbjct 17955 GTGAAAATATAGCGAGGGCTGGCAGCATCTTTGCCACCATGAAGCCGAGTTCCAAACTGA 17896
Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148
||| |||| || | ||| | |||||| |||||||| ||||||||||||||||||
Sbjct 17895 CCAATAGGCTGAAGCAAGTTAATGTTGTTACTTCCCACGAAGTTCTGAGCCAAATTCACA 17836
Query 152149 ATCGT 152153
|| ||
Sbjct 17835 ATAGT 17831
>seq351
Length=365305
Score = 100 bits (110), Expect = 3e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088
|||||||||||||| | || || | |||||||||||| ||||| || ||||||||
Sbjct 266785 GTGAAGATGTATCGAGGACTAGCAGAATCCTTGCCACCATGCAGCCTGGTACCAAACTGA 266726
Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148
||| ||||| | |||||| || || ||| ||||| ||||||||||||||||| | |
Sbjct 266725 CCAATGGGCTGCAAGAGGTTCAGATTATTGCTACCCACAAAATTCTGAGCCAAATTGATA 266666
Query 152149 ATCGT 152153
|| ||
Sbjct 266665 ATGGT 266661
Score = 100 bits (110), Expect = 3e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
||||| ||||| |||| || |||| ||||||||||||| || | ||||| || ||
Sbjct 266785 GTGAAGATGTATCGAGGACTAGCAGAATCCTTGCCACCATGCAGCCTGGTACCAAACTGA 266726
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
||| | |||| |||||||||||| || ||| |||||||| || |||||||| |||| |
Sbjct 266725 CCAATGGGCTGCAAGAGGTTCAGATTATTGCTACCCACAAAATTCTGAGCCAAATTGATA 266666
Query 117425 ATCGT 117429
|| ||
Sbjct 266665 ATGGT 266661
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546581420965600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |