Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq4400 105 6e-18
>seq4400
Length=129001
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || ||||||||| | || || || || ||||| || |
Sbjct 40353 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 40412
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || |||| || || || || || || ||||||||||| || || || ||
Sbjct 40413 GATACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCAGACCAG 40472
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || ||||| || |||| || | || | ||||||||||||
Sbjct 40473 CAGAGGCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTCTCCGATTACAAC 40532
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|| || || ||||||||| | || |||| ||||| || ||||||||
Sbjct 40533 ATCCAGAAAGAGTCGACCCTGCACCTGGTGCTGCGTCTGAGGGGTGGC 40580
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || ||||||||| | || || || || ||||| || |
Sbjct 39897 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 39956
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || |||| || || || || || || ||||||||||| || ||||| ||
Sbjct 39957 GATACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCCGACCAG 40016
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || ||||| || |||| || | || | ||||||||||||
Sbjct 40017 CAGAGGCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTCTCCGATTACAAC 40076
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || ||||||||| | || | || | ||| || ||||||| ||
Sbjct 40077 ATCCAGAAAGAGTCGACCCTGCACCTCGTGCTCCGTCTGAGGGGTGGTAT 40126
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || ||||||||| | || || || || ||||| || |
Sbjct 40125 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 40184
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || |||| || || || || || || ||||||||||| || ||||| ||
Sbjct 40185 GATACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCCGACCAG 40244
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || ||||| || |||| || | || | ||||||||||||
Sbjct 40245 CAGAGGCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTCTCCGATTACAAC 40304
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || ||||||||| | || | || | ||| || ||||||| ||
Sbjct 40305 ATCCAGAAAGAGTCGACCCTGCACCTCGTGCTCCGTCTGAGGGGTGGTAT 40354
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434414046877440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |