Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_028685.1 Length=62851 Score E Sequences producing significant alignments: (Bits) Value seq59329 86.0 3e-12 >seq59329 Length=399 Score = 86.0 bits (94), Expect = 3e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24585 ATGCGTGATATCCGGCAGGTTCTTGAGCGCTGGGGGGCATGGGCGGCAAATAACCATGAG 24644 ||||||||||| || ||||| | || || |||||||| |||| | |||| || || Sbjct 229 ATGCGTGATATTCGCCAGGTGTTAGAACGGTGGGGGGCTTGGGTTGTTGATAATCAGGAA 170 Query 24645 GATGTTACATGGTCGCCCATTGCTGCCGGATTTAAGAGGCTGATCCCCGAAAAAGTAAAA 24704 || ||||| || || |||||||| ||||| |||||||||| |||||||| || Sbjct 169 TCAGTATATTGGTCACCAATAGCTGCCGGGTTTAAAGGGCTGATCCCTGAAAAAGTTAAG 110 Query 24705 TCACGTCCACAGTGTTGTGACGATGACGCGATGATTATATGCGGGTGTATGGCTCGCCTT 24764 || | | || |||| ||||| || || | |||| ||| |||||| || Sbjct 109 AGTCGGCAATCATGCAGTGATGATGATGCTCTGGTGATATCCGGCATTATGGCAAAACTG 50 Query 24765 AACAGGAACAACAGCGATCTGCATGACTTGCTGGTTGATTATTACGT 24811 || | ||||| ||| ||||||| |||| |||| || || || Sbjct 49 AATATCCGTAACAGTGATATGCATGATCTGCTTTTTGACTACTATGT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200771139400304