Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_028699.1
Length=40740
Score E
Sequences producing significant alignments: (Bits) Value
seq55783 250 6e-62
seq71794 158 3e-34
seq86214 152 1e-32
seq71091 127 5e-25
seq80897 109 1e-19
>seq55783
Length=466
Score = 250 bits (276), Expect = 6e-62
Identities = 330/458 (72%), Gaps = 0/458 (0%)
Strand=Plus/Plus
Query 6161 GAGCTGGAGCGACTCGACCAGGGGCTGAATCTGCCACTGGTGGGTTATACCTGGACACGT 6220
|| ||||| || || || ||| | || ||||||||||| ||||||| || ||
Sbjct 1 GAACTGGAACGTCTTGATCAGACTATCAACCTGCCACTGGTTCAGTATACCTACACCCGG 60
Query 6221 GATATCCAGTTGCGCGAAGACGTCTCTATCGCAGATGACATTTCCAGCTGGACGAATACC 6280
||||| ||||| || ||||| || |||||||||||||| |||||||| | || ||||
Sbjct 61 GATATTCAGTTCCGTGAAGATGTTTCTATCGCAGATGATATTTCCAGTTTTACCCGTACC 120
Query 6281 AGTTTTGGCGTGGCGGGTTCTGGCGCTAATCCGAATGGTAAAAACTGGGTAGGCAAAGAT 6340
|||||| | ||||| || || |||||||||||||||||||||||||||||||||
Sbjct 121 GGTTTTGCGGCAGCGGGATCCGGTGCTAATCCGAATGGTAAAAACTGGGTAGGCAAAACA 180
Query 6341 TCAACTGCCATTGCTGGCGTTAATGTTGATATCAGTAAAGACGGCAATCCGCTGAACCTT 6400
|| || || | || || | ||||| |||||| ||||| || ||| ||| | |
Sbjct 181 TCCACAGCACTGGCGGGTATCAATGTGGATATCCAGAAAGAGGGGTTTCCTCTGCAGTTA 240
Query 6401 TGGGGGATGGAGCTGGGATGGACTGTTGTTGAGCTGGCTGCGGCACAGCAGGTAGGCCGT 6460
||||| |||||||| || |||||| ||||||| | || ||||||||||| || ||
Sbjct 241 TGGGGAATGGAGCTCGGCTGGACTATTGTTGAATTACAGGCCGCACAGCAGGTTGGTCGC 300
Query 6461 CCGATCGACACTCAGAAGTACGACGGGATGCAGCTTAAATGGCAGATGGATAACGACGAA 6520
|| ||||| | || || | ||||| ||| ||| |||||| | |||||| || ||
Sbjct 301 CCTATCGATTCGCAAAAACATGACGGTATGACGCTGAAATGGAATATGGATGCGGATGAG 360
Query 6521 CAGGTTTACGTCGGAGACGAAGCGCTTGGTTTGAAAGGTCTGACGAATCTCGTTGGTGTG 6580
||||| || |||| || || | || || | ||||||||| ||| | | | |||
Sbjct 361 CAGGTGTATATCGGCGATGACGGTCTGGGGGTAAAAGGTCTGCTGAACTTTGACAGCGTG 420
Query 6581 ACGCTGAACAACGCAACGAAGACCTGGGCTAACTCCAC 6618
|| ||||| || || ||||| | |||||| | || ||
Sbjct 421 ACTCTGAATAATGCCGCGAAGCCGTGGGCTCAGTCTAC 458
>seq71794
Length=267
Score = 158 bits (174), Expect = 3e-34
Identities = 192/262 (73%), Gaps = 0/262 (0%)
Strand=Plus/Minus
Query 6696 CTGATCTGCGCATTCCGCCAGAGCAGTATTCATTGCTGGCGAGCCGTAAGGTTTCCGAAG 6755
||||||| | | ||||| ||||||| | ||||| | | | || || || |
Sbjct 262 CTGATCTTCTGCTGCCGCCTGAGCAGTTTGCATTGTTATCATCCACTATCGTGTCGAGTG 203
Query 6756 CGGGTAACCAGTCACTGCTGACCTATCTGGCTGTGAACACTATCGCTTTCCACCAGAACG 6815
| |||||||||||| | ||||| || ||| |||||| ||||| | |||||||| |
Sbjct 202 CCGGTAACCAGTCATTACTGACTTACCTGCAGACGAACACCATCGCATATCACCAGAATG 143
Query 6816 GCGTTCCGCTGGAAATCAAAGCGGTAAAATGGCTGAAAGGGCGCGGGGTTGGCGGTAAAG 6875
| | |||||| | ||| || || || ||||||||||| ||||| |||| |||||||
Sbjct 142 GTATGCCGCTGAACATCCGTGCAGTTAAGTGGCTGAAAGGTCGCGGTATTGGTGGTAAAG 83
Query 6876 ACCGTATGGTCGCCTACACCAACGATAAGAAATACGTCCGCTATCCACTGGTTCCGCTGC 6935
| || ||| | || |||||||| ||||| || |||||||||| || ||||||||||| |
Sbjct 82 ATCGCATGATGGCTTACACCAATGATAAAAAGTACGTCCGCTTCCCGCTGGTTCCGCTTC 23
Query 6936 AAAGCGTTCCTGTTCAGTATCG 6957
| ||| |||| || ||||| ||
Sbjct 22 AGAGCATTCCGGTGCAGTACCG 1
>seq86214
Length=214
Score = 152 bits (168), Expect = 1e-32
Identities = 152/197 (77%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 2801 ATCCCCGCCTGGCGTATTCACCATAGCCGCCTGATTCGCTTCGATGGGGTGACGCTGCCA 2860
|| || || ||||| |||| || ||||||||||| ||| ||||||| ||||| ||||
Sbjct 212 ATTCCGGCGTGGCGGGTTCATCACAGCCGCCTGATCCGCCTCGATGGTGTGACATTGCCG 153
Query 2861 TTCCAGCAGAAGATGACCGAGAACGAATGGGGAATGTCGGTTGTAGAGCGTATCTGGGAT 2920
| ||||||| || | || ||||||||||||||||||||||| || || || | ||
Sbjct 152 TACCAGCAGTCGAAAGCAGAAAACGAATGGGGAATGTCGGTTGTTGAACGCATATTTGAC 93
Query 2921 CGGCTTACTGCGTTCGACAGCGCCACTGTCGGTGCGGCGCAGCTGGTCTACAAAGCGCAT 2980
|| || || || || |||||| | | || |||||||| |||||||| ||||| || |||
Sbjct 92 CGCCTGACAGCATTTGACAGCACATCGGTGGGTGCGGCTCAGCTGGTGTACAAGGCACAT 33
Query 2981 CTGCGGACCTACAAAGT 2997
|| || || ||||||||
Sbjct 32 CTCCGTACATACAAAGT 16
>seq71091
Length=271
Score = 127 bits (140), Expect = 5e-25
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 2019 GGTATGGCCTACAACCCGGACGAAATTATCTCCATCAGCAGCACGATGGAGAGCAAAGAC 2078
|| |||| ||| | || |||||||| || || ||||||||||| || ||| |||||||
Sbjct 4 GGGATGGATTACGATCCCGACGAAATCATTTCTATCAGCAGCACAATCAAGAACAAAGAC 63
Query 2079 AAACTCATCATCGAGCTTTCGCAGCCAACCTACTCCATTAACGGCGTGGGGAAAATCGTT 2138
||||| | | ||||| || ||||| || | | | ||| || || ||||||||
Sbjct 64 AAACTGGTTGTGGAGCTGTCACAGCCGACGTGGACTAAAAACTCTGTCGGCAAAATCGTC 123
Query 2139 GTGGATAAACAGCCTGACGGCACCAGGTCGCCGAACCTCGCCGACTCGGTGATGATCAGC 2198
| ||||||||||| ||||||| | ||| || ||||| || || |||||||||||| |
Sbjct 124 ATTGATAAACAGCCGGACGGCATGAAGTCACCAAACCTAGCGGATGCGGTGATGATCAAC 183
Query 2199 TACGCGCCAATGAATTCAGCCCTCAACATCTGGGAACTGCTAGGGAGA 2246
|| || || ||| | | |||| | ||||||| | | || || |||
Sbjct 184 TATGCCCCGATGGAAGATGACCTCGATATCTGGGGATTACTGGGCAGA 231
>seq80897
Length=229
Score = 109 bits (120), Expect = 1e-19
Identities = 138/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 3091 AGGCATGACGCTAATGGATGCCAAGGATACCTTCGAAACCCACCAGTACAGTTTCAGCGG 3150
||| |||||||| |||||| | | ||| || ||||| ||| || ||||||||
Sbjct 1 AGGGATGACGCTGATGGATACTGATGATGAGTTTGAAACTCACTCATATTCATTCAGCGG 60
Query 3151 TCTGGATGACATTCTTTCGCAGTTCGCCGAGCAGATTAGCGGTGCTGTTGGCATTCCACT 3210
|| ||| || | || | | ||| || |||||||| |||||||| || ||||| ||
Sbjct 61 ACTTGATAACGTGCTGGCACGGTTTGCTGAGCAGATAAGCGGTGCGACCGGTATTCCGCT 120
Query 3211 GGTGCGCCTGTTCGGGCAGTCCCCTAAAGGTTTCTCAACGGGTGACGCAGACCTTGCCAA 3270
||| ||||||||||| ||||| || ||| || || ||||| || |||||| ||||
Sbjct 121 GGTCCGCCTGTTCGGTCAGTCTCCGTCAGGGTTTAATACCGGTGATGCTGACCTTTCCAA 180
Query 3271 CTATTATGAC 3280
|||||| |||
Sbjct 181 CTATTACGAC 190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130102911774128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |