Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_028959.1
Length=52261
Score E
Sequences producing significant alignments: (Bits) Value
seq57556 89.7 2e-13
>seq57556
Length=433
Score = 89.7 bits (98), Expect = 2e-13
Identities = 223/333 (67%), Gaps = 17/333 (5%)
Strand=Plus/Minus
Query 35143 TTACAACAACCAAAAGTACTGTTTGCTGATTCGGTAGCATCTTCTGACAATTCAATCCTA 35202
||| ||| | ||||| || ||| ||||| | ||| || |||| ||||||| ||
Sbjct 355 TTAGAACCAGCAAAAATA---TTTACTGATGCAGTAACAGGAACTGAAGATTCAATTCTT 299
Query 35203 ATTGGAGAATTAGCAAAATTGCTTAGACAAAATGGAATTGATACAGGACAAAATAGATTA 35262
|| |||||||||||| | | | ||||| ||| |||||| |||| |||| ||| ||
Sbjct 298 ATAAGAGAATTAGCAACTATATTAAATCAAAAAGGAGTTGATATAGGAGAAAAGAGACTA 239
Query 35263 TTTGACTGGTTAAGAAATAATGGTTACTTAATAAAACGTAAAGGTGAGGATTACAATACA 35322
|| | ||| | || | ||||| || ||||| ||| | | ||| ||| | || |
Sbjct 238 TTCAAATGGATGAGGGAAAATGGGTATTTAATCAAAAGAGATGGTATAGATAAGAACTTA 179
Query 35323 CCAACTCAAAAAAGTGTAGATTTAGGAGTTATAGAAACAAAAGAAGGTACAAGAGTACAT 35382
|| ||||||||| | ||| | | | || ||||| | ||| || |||| | ||
Sbjct 178 CCTACTCAAAAATCCATGGATCTTAAATTAATGGAAACTAGGGAATCTATAAGA-CAGAT 120
Query 35383 -CCAGATGGTCAT--ACAAGTATTACTAAA-ACACCTAAGATTACTGGTAAGGGACAAAT 35438
||| |||||| || | |||| ||| ||| | | ||||| || || || |||||
Sbjct 119 ACCA---GGTCATGAACCAAAGTTACAAAAGACAACAAGAATTACCGGAAAAGGTCAAAT 63
Query 35439 ATACTTTATTAATAAGTT------TAAAAAGAA 35465
|| || |||||||| || |||||||||
Sbjct 62 TTATTTCATTAATAAATTCTTAGGTAAAAAGAA 30
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 166929496378072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |