Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_029003.2
Length=29733
Score E
Sequences producing significant alignments: (Bits) Value
seq39865 132 9e-27
seq75839 129 1e-25
seq80047 93.3 8e-15
>seq39865
Length=1072
Score = 132 bits (146), Expect = 9e-27
Identities = 143/187 (76%), Gaps = 2/187 (1%)
Strand=Plus/Plus
Query 26921 TGACTGGCGTGAACAAAAGCGCCGCACTCGTGAATTTCTCAAAGGTCTGGATCTCGAAGA 26980
||| ||||| ||||||||||| || || ||||||||||||||| | |||| || ||||
Sbjct 885 TGAATGGCGGGAACAAAAGCGGCGGACACGTGAATTTCTCAAATCTATGGAACTGAAAGA 944
Query 26981 CGAAGACGGCAACCGTATCAGCCTGATTGAAAAATTTGACGGCTCGGTC-GCTAACCCTG 27039
|| || || ||||| ||||||||||||| ||||| | ||| | || || || || |
Sbjct 945 TGAGGAAGGAAACCGCGTCAGCCTGATTGATAAATTCTATGGC-AGTTCAGCAAATCCGG 1003
Query 27040 CGATACGCCGCTGCGAGCTGATGACCCGCATCCGTGGGTTTGAAAATATCTGCAATGAAC 27099
|||| ||| | || ||||| || || | |||||||||||||||||||||||||
Sbjct 1004 CGATCCGCAGAACTGAAATGATGGTGCGGATAAGAGGGTTTGAAAATATCTGCAATGAAC 1063
Query 27100 TCGGATA 27106
|||| ||
Sbjct 1064 TCGGCTA 1070
>seq75839
Length=248
Score = 129 bits (142), Expect = 1e-25
Identities = 161/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 27132 GCACCGTCTAAATATCACGCCACGACTAAAGCGGGATACCGTAACAGCAAATGGAACGGA 27191
||||| || ||||||||||| |||||| || |||||||| ||||||||||||||
Sbjct 3 GCACCATCAAAATATCACGCGACGACTCGTCACGGGCACCGTAACCGCAAATGGAACGGA 62
Query 27192 GCCAGCCCGTCGGACACGCAGAGCTACCTAACCGGCCTTTGGGCGCGCATTCGTGCCAAG 27251
||||||| | |||||||||| ||||| | | ||| ||||| || ||
Sbjct 63 AGCAGCCCGGCAGACACGCAGAAATACCTCAGTAAAGTATGGAGTAAAATTCGGGCGAAA 122
Query 27252 CTACATCGGGAAGAAATTCGCATTTTCGGCATACGTGTTGCCGAGCCTCATCACGACGGA 27311
|| || ||||| || | || || || || || || ||||| |||||||| || ||||||
Sbjct 123 CTTCACCGGGATGATTTACGGATCTTTGGTATTCGCGTTGCAGAGCCTCACCATGACGGA 182
Query 27312 ACGCCGCATTGGCACATGCTTATGTTCATGTTGCCAGAAGA 27352
|| ||||| ||||| |||||| | || ||| || |||||
Sbjct 183 ACCCCGCACTGGCATATGCTTTTCTTTATGCGCCCGGAAGA 223
>seq80047
Length=232
Score = 93.3 bits (102), Expect = 8e-15
Identities = 122/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 27372 ATCATCCGCGATTATGCATGGGAGGAAGACCGCCACGAACTTAAAAGTGATAAGGCTAAA 27431
||| | || || ||||| | ||||||| ||||||||| | | ||| ||
Sbjct 55 ATCCTGCGTGACTATGCCTATCAGGAAGATTTCCACGAACTGACCACACGTAAAGCGCTG 114
Query 27432 AAAGCCCGCTTTCATGCTGAGGCTATCGACCCGGAGAAAGGCAGTGCTACCGGTTATGTC 27491
||||| || ||||||||||| | ||| || ||||| ||||| |||||| || ||||||
Sbjct 115 AAAGCACGGTTTCATGCTGAAGTTATAGATCCGGATAAAGGTTCTGCTACGGGCTATGTC 174
Query 27492 GCGAAATACATTTCTAAAAACATCGACGGTTATGCTCTCGATGACGAAA 27540
|| |||||||| || |||||| | || || || || | ||||| ||||
Sbjct 175 GCCAAATACATATCAAAAAACGTTGATGGGTACGCAATGGATGATGAAA 223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 94919315147480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |