Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_029003.2 Length=29733 Score E Sequences producing significant alignments: (Bits) Value seq39865 132 9e-27 seq75839 129 1e-25 seq80047 93.3 8e-15 >seq39865 Length=1072 Score = 132 bits (146), Expect = 9e-27 Identities = 143/187 (76%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 26921 TGACTGGCGTGAACAAAAGCGCCGCACTCGTGAATTTCTCAAAGGTCTGGATCTCGAAGA 26980 ||| ||||| ||||||||||| || || ||||||||||||||| | |||| || |||| Sbjct 885 TGAATGGCGGGAACAAAAGCGGCGGACACGTGAATTTCTCAAATCTATGGAACTGAAAGA 944 Query 26981 CGAAGACGGCAACCGTATCAGCCTGATTGAAAAATTTGACGGCTCGGTC-GCTAACCCTG 27039 || || || ||||| ||||||||||||| ||||| | ||| | || || || || | Sbjct 945 TGAGGAAGGAAACCGCGTCAGCCTGATTGATAAATTCTATGGC-AGTTCAGCAAATCCGG 1003 Query 27040 CGATACGCCGCTGCGAGCTGATGACCCGCATCCGTGGGTTTGAAAATATCTGCAATGAAC 27099 |||| ||| | || ||||| || || | ||||||||||||||||||||||||| Sbjct 1004 CGATCCGCAGAACTGAAATGATGGTGCGGATAAGAGGGTTTGAAAATATCTGCAATGAAC 1063 Query 27100 TCGGATA 27106 |||| || Sbjct 1064 TCGGCTA 1070 >seq75839 Length=248 Score = 129 bits (142), Expect = 1e-25 Identities = 161/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 27132 GCACCGTCTAAATATCACGCCACGACTAAAGCGGGATACCGTAACAGCAAATGGAACGGA 27191 ||||| || ||||||||||| |||||| || |||||||| |||||||||||||| Sbjct 3 GCACCATCAAAATATCACGCGACGACTCGTCACGGGCACCGTAACCGCAAATGGAACGGA 62 Query 27192 GCCAGCCCGTCGGACACGCAGAGCTACCTAACCGGCCTTTGGGCGCGCATTCGTGCCAAG 27251 ||||||| | |||||||||| ||||| | | ||| ||||| || || Sbjct 63 AGCAGCCCGGCAGACACGCAGAAATACCTCAGTAAAGTATGGAGTAAAATTCGGGCGAAA 122 Query 27252 CTACATCGGGAAGAAATTCGCATTTTCGGCATACGTGTTGCCGAGCCTCATCACGACGGA 27311 || || ||||| || | || || || || || || ||||| |||||||| || |||||| Sbjct 123 CTTCACCGGGATGATTTACGGATCTTTGGTATTCGCGTTGCAGAGCCTCACCATGACGGA 182 Query 27312 ACGCCGCATTGGCACATGCTTATGTTCATGTTGCCAGAAGA 27352 || ||||| ||||| |||||| | || ||| || ||||| Sbjct 183 ACCCCGCACTGGCATATGCTTTTCTTTATGCGCCCGGAAGA 223 >seq80047 Length=232 Score = 93.3 bits (102), Expect = 8e-15 Identities = 122/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 27372 ATCATCCGCGATTATGCATGGGAGGAAGACCGCCACGAACTTAAAAGTGATAAGGCTAAA 27431 ||| | || || ||||| | ||||||| ||||||||| | | ||| || Sbjct 55 ATCCTGCGTGACTATGCCTATCAGGAAGATTTCCACGAACTGACCACACGTAAAGCGCTG 114 Query 27432 AAAGCCCGCTTTCATGCTGAGGCTATCGACCCGGAGAAAGGCAGTGCTACCGGTTATGTC 27491 ||||| || ||||||||||| | ||| || ||||| ||||| |||||| || |||||| Sbjct 115 AAAGCACGGTTTCATGCTGAAGTTATAGATCCGGATAAAGGTTCTGCTACGGGCTATGTC 174 Query 27492 GCGAAATACATTTCTAAAAACATCGACGGTTATGCTCTCGATGACGAAA 27540 || |||||||| || |||||| | || || || || | ||||| |||| Sbjct 175 GCCAAATACATATCAAAAAACGTTGATGGGTACGCAATGGATGATGAAA 223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94919315147480