Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_029044.1 Length=154434 Score E Sequences producing significant alignments: (Bits) Value seq28316 87.8 2e-12 seq32903 84.2 2e-11 >seq28316 Length=15736 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 95741 ATGCGAAGGTAGCTCAGCTGGTAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGATCGT 95800 ||||||| ||||||||| ||||||||| | ||||||||||||| | ||||||||| ||| Sbjct 2406 ATGCGAAAGTAGCTCAGTTGGTAGAGCACAACCTTGCCAAGGTTGGGGTCGCGGGTTCGA 2465 Query 95801 AACCCGTTCTTCGCTC 95816 | ||||| ||||||| Sbjct 2466 ATCCCGTCTTTCGCTC 2481 >seq32903 Length=5258 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 95743 GCGAAGGTAGCTCAGCTGGTAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGATCGTAA 95802 ||||| ||||||||| ||||||||| | ||||||||||||| | ||||||||| ||| | Sbjct 363 GCGAAAGTAGCTCAGTTGGTAGAGCACAACCTTGCCAAGGTTGGGGTCGCGGGTTCGAAT 304 Query 95803 CCCGTTCTTCGCTC 95816 ||||| ||||||| Sbjct 303 CCCGTCTTTCGCTC 290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 493487862393280