Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_029048.1
Length=131326
Score E
Sequences producing significant alignments: (Bits) Value
seq17593 100 2e-16
>seq17593
Length=34368
Score = 100 bits (110), Expect = 2e-16
Identities = 156/221 (71%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 89768 AGTTCACACCTTCTTTCACTTTCCAGATTTGAATTGGGAAAATTGGTGTTTCTCCATT-- 89825
|||| || || ||||| | ||| ||||||| || || || | ||| ||| || ||
Sbjct 1420 AGTT-ACTCCATCTTTTATTTTAAAGATTTGTATAGGAAATACAGGTACTTCACCTTTAG 1478
Query 89826 -TCCGACTCCTTCATAAGTAGATTTTAGTATTTCTCTTATTATACATCTACCTTCTGCTG 89884
||| | ||||| ||||||| | | ||| || | ||| |||||| | |
Sbjct 1479 CTCCTAAGCCTTCTATTGTAGATTGCATAAGCTCTTCCATAACCATTCTTCCTTCTTCAG 1538
Query 89885 AAGTATCTGTACCATAATTTATAGAACTAAACACGACCTGATTTCCACCCCTTGAATGAA 89944
|||||||||||||||| |||||||| ||||| || || ||||| ||||| || || || |
Sbjct 1539 AAGTATCTGTACCATAGTTTATAGAGCTAAATACTACTTGATTACCACCTCTAGAGTGCA 1598
Query 89945 TTGTGTTCATATTATGTATAAATGACTCCATTGATTGATGA 89985
||||||| | || ||||| || |||||| | ||| |||
Sbjct 1599 TTGTGTTTAGGTTGTGTATGAAGCCCTCCATAGCTTGGTGA 1639
Score = 91.5 bits (100), Expect = 1e-13
Identities = 187/276 (68%), Gaps = 3/276 (1%)
Strand=Plus/Plus
Query 89470 TTAGCTTCATTATTTGGATATTTTTCTTTAGCCTCTAATGCCATTTTTACTAAATTAAGA 89529
||||||||||| || || | |||| ||||| || | || | | | | ||| |
Sbjct 1064 TTAGCTTCATT-TTCGGCTGCTTTT--TTAGCTTCAATAGCTAGTCTAGGCATATTTAAT 1120
Query 89530 GTCGTAAAAGATAGATTTCCTCTTCCTATACTTGTTTTTTCTCCATGCAAATCTTCAAAT 89589
|| ||||| || || ||||| | ||||| | || ||||| ||||||||||||||| ||
Sbjct 1121 GTTGTAAATGAAAGGTTTCCACGTCCTAAAGAGGTCTTTTCACCATGCAAATCTTCATAT 1180
Query 89590 ACCCTTGTACGACACCCCATTGTTGCTACTTCATAAATATATCTGTTTGGGTCGCACATT 89649
|| | ||| | ||| ||||| || || | ||| | | ||||| || ||||||
Sbjct 1181 ACTCGTGTTCTACAACCCATAGTAGCCAATTCGTTATGGTATCTCTTAGGGTCGTTAGCA 1240
Query 89650 TTCCATTTTACATGCTTATTGAAGGTTGCATCTAAATTTAAAAAATTAGGAAAAAATCTT 89709
| |||||| ||| ||||| ||| ||| |||||| | ||| || || |||| |
Sbjct 1241 TCCCATTTCTCATTTTTATTAAAGCTTGTATCTAAGAACATAAAGTTTGGGAAAAGAGCT 1300
Query 89710 TTAGCTGATACTTTACATGCTAATTCATATAAGTCA 89745
|||| || | || ||| || | |||||| |||
Sbjct 1301 TTAGATGTTGTTTGACAAGCCTTTAAATATAAATCA 1336
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419643389455004
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |