Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_029057.1 Length=134742 Score E Sequences producing significant alignments: (Bits) Value seq25394 107 2e-18 >seq25394 Length=23467 Score = 107 bits (118), Expect = 2e-18 Identities = 201/289 (70%), Gaps = 10/289 (3%) Strand=Plus/Plus Query 73401 TTGTCTTGCACCTACATTCGATGTTAGTATAATGATATGGTTATTACACATCATCTT-AC 73459 ||| | || |||||| |||||||| | |||||| | || ||| | ||| || || Sbjct 10659 TTGACGTGAACCTACGTTCGATGTCATTATAATAACGGTATTTTTAAA-ATCTACTAGAC 10717 Query 73460 GTCCTTGGTT--ATCTGTGATATGACCTTCATCAAACATTTGAAGCAAGAGGTTGTAAAC 73517 |||| | || |||||| | | |||||||| || | |||||| | || || |||| Sbjct 10718 GTCC--GCTTCCATCTGTTAATCGTCCTTCATCTAATACTTGAAGAAGTAGATT--AAAC 10773 Query 73518 ACTT--GGATCAGCTTTCTCCACCTCATCACCCAAGATAATACCAGAGGGATTTCGACTT 73575 |||| |||| ||||| || | ||| || || |||||| | || ||| | | Sbjct 10774 ACTTCTGGATGTGCTTTTTCAATCTCGTCTAATAAAATAATAGAGTAAGGGCGTCGGCGT 10833 Query 73576 AACCACTCTGTAAGTAATCCACCTTCTTCATAACCAACATAACCACTTGAGGAACCAATC 73635 | | |||||||||| |||||| ||||||||||||||||||||| || ||||| | | Sbjct 10834 ACACGCTCTGTAAGTTGTCCACCATCTTCATAACCAACATAACCAGGAGATGAACCTACC 10893 Query 73636 AGTTTATTTACTGCAGTTTTATCTGAATATTCACTCATATCAAGACGAA 73684 | |||| || | | || || |||||||||||| |||| ||||| Sbjct 10894 ATTTTAGAAACAGAATACTTCTCCATATATTCACTCATGTCAATACGAA 10942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430562229998076