Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_029066.1 Length=48666 Score E Sequences producing significant alignments: (Bits) Value seq70805 95.1 4e-15 >seq70805 Length=272 Score = 95.1 bits (104), Expect = 4e-15 Identities = 184/264 (70%), Gaps = 17/264 (6%) Strand=Plus/Plus Query 24407 ACGGCAGAGGGGCGGGCAGGGTACTTCTTCGATTACTCGCAGGCCGCTGAGAA-GCAA-- 24463 ||||||||||| ||||| || || ||||||||||| | || ||||| || ||| Sbjct 17 ACGGCAGAGGGTCGGGCCGGTTATTTCTTCGATTATTGCCAACTGGCTGAAAAAGCACTG 76 Query 24464 ---CAGGCCGCAAAGCAGCCGCTCGGCAAGCTGGACTGGAAGTTCTTCTTCTTCAGCTGG 24520 |||| ||||| || ||| || |||||||||||||| ||||| ||| ||| Sbjct 77 ATGCAGG--GCAAAACATTATCTC--CA--CTGGACTGGAAGTTTTTCTTTTTCTCTTGG 130 Query 24521 TGGAAGAATGCCGAGTACTGGCTGGACCCGGCCGGAACGCTCCTGCCGCAGCGCCTGACA 24580 ||||||||| | ||||| | ||||| | | || | ||||| |||||||| Sbjct 131 TGGAAGAATCCGCAGTACGCAATCGACCCTGTTG---AGCAGTTACCGCAACGCCTGACT 187 Query 24581 GATTATTTCGCCGAGCT-TGAGGCAAAGCACGGCATCAAGACTAACGAAGGTCAGCGCGC 24639 || ||||| | ||||| | ||||||| | || |||| | ||||| | ||| || Sbjct 188 GACTATTTTGATGAGCTATCAGGCAAA-TATGGAATCACGCTCAACGACCGGCAGAAAGC 246 Query 24640 CTGGTACGCCGCCAAGGAAAAGAC 24663 ||||||| |||||| ||||| || Sbjct 247 CTGGTACTACGCCAAAGAAAAAAC 270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155438169960992