Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq8719 141 8e-29
>seq8719
Length=77844
Score = 141 bits (156), Expect = 8e-29
Identities = 128/161 (80%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624
||||| ||||| ||||| || || || ||||| |||| ||||| |||||||| | ||||
Sbjct 22386 GATCTTCCTCTCATGGCCCTACCTCCATGCCATGCCCTTTGCCAGTTCTACGTGGTGAAT 22445
Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684
|| ||||||||||||||||| || || | || || |||||||| | || ||||| |||
Sbjct 22446 GGTGAGCTGTCCTGCCAGCTGTACCAGAGGTCAGGGGACATGGGCCTGGGTGTGCCCTTC 22505
Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725
||||| || || || || |||||||| |||||||| || ||
Sbjct 22506 AACATCGCCAGCTATGCCCTGCTCACCTACATGATTGCACA 22546
Score = 141 bits (156), Expect = 8e-29
Identities = 128/161 (80%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679
|| || |||||||| |||||||| || || || || |||||||| ||||| || | |||
Sbjct 22546 TGTGCAATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGCACACCCAGGCCC 22487
Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739
||||| || || | || || ||||||||||||||||| |||||| | |||||||| |||
Sbjct 22486 ATGTCCCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACCACGTAGAACTGG 22427
Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780
|| |||| ||||| || || || ||||| ||||| |||||
Sbjct 22426 CAAAGGGCATGGCATGGAGGTAGGGCCATGAGAGGAAGATC 22386
Score = 91.5 bits (100), Expect = 1e-13
Identities = 107/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 34302 CCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTC 34361
|||| | || || ||| ||| |||||||||||||| || | || || ||||||||
Sbjct 19505 CCAACAAACTGTCTTCCAAGGGAGTGAAGATCTGGGATGCCAATGGATCCCGAGACTTCT 19564
Query 34362 TGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCC 34421
|||||| | ||||||| | | | || || || || || ||||| || || || || |
Sbjct 19565 TGGACAGCCTGGGGTTCTCCACAAGAGAAGAAGGGGATTTAGGCCCAGTTTATGGCTTTC 19624
Query 34422 AGTGGAGACACTTTGGGGCGGAGTA 34446
||||||| ||||||||||| || ||
Sbjct 19625 AGTGGAGGCACTTTGGGGCAGAATA 19649
Score = 91.5 bits (100), Expect = 1e-13
Identities = 107/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958
|| || ||||||||||| |||||||| || || || || ||||| || || || || ||
Sbjct 19649 TATTCTGCCCCAAAGTGCCTCCACTGAAAGCCATAAACTGGGCCTAAATCCCCTTCTTCT 19590
Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018
| | | ||||||| | |||||| |||||||| || || | || ||||||||||||
Sbjct 19589 CTTGTGGAGAACCCCAGGCTGTCCAAGAAGTCTCGGGATCCATTGGCATCCCAGATCTTC 19530
Query 7019 ACCCCCCGGGACGAGAGCTCCTTGG 7043
|| ||| ||| || || | ||||
Sbjct 19529 ACTCCCTTGGAAGACAGTTTGTTGG 19505
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447742572507840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |