Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq4400 158 3e-33
seq7134 134 3e-26
seq66 122 2e-22
seq11706 120 7e-22
seq11308 105 2e-17
seq8809 100 7e-16
seq7041 96.9 8e-15
>seq4400
Length=129001
Score = 158 bits (174), Expect = 3e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || || |||||||| |||||||| ||||| | || || | |||||
Sbjct 40108 AGCACGAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATCC 40049
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || ||||| || | || ||||| ||||| | ||||| || |||
Sbjct 40048 TCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTATCC 39989
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| |||||||| |||||||| || | || ||||| || ||||| |||
Sbjct 39988 TGGATCTTGGCCTTCACGTTCTCGATGGTATCGCTGGGCTCCACCTCCAGGGTGATGGTC 39929
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| || ||||| ||||| || || | |||||||||
Sbjct 39928 TTGCCGGTGAGGGTCTTCACGAAGATCTGCATTTT 39894
Score = 152 bits (168), Expect = 1e-31
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || || |||||||| |||||||| ||||| | || || | |||||
Sbjct 40336 AGCACGAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATCC 40277
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || ||||| || | || ||||| ||||| | ||||| || |||
Sbjct 40276 TCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTATCC 40217
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| |||||||| |||||||| || | || ||||| || ||||| |||
Sbjct 40216 TGGATCTTGGCCTTCACGTTCTCGATGGTATCGCTGGGCTCCACCTCCAGGGTGATGGTC 40157
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| ||||| || || | ||||||
Sbjct 40156 TTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 40125
Score = 152 bits (168), Expect = 1e-31
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || || |||||||| |||||||| ||||| | || || | |||||
Sbjct 40564 AGCACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATCC 40505
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || ||||| || | || ||||| ||||| | ||||| || |||
Sbjct 40504 TCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCTGGAGGGATGCCTTCTTTATCC 40445
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| |||||||| |||||||| || | || ||||| || ||||| |||
Sbjct 40444 TGGATCTTGGCCTTCACGTTCTCGATGGTATCGCTGGGCTCCACCTCCAGGGTGATGGTC 40385
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| ||||| || || | ||||||
Sbjct 40384 TTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 40353
>seq7134
Length=91468
Score = 134 bits (148), Expect = 3e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | ||| | ||||||||||| |||||||| || || | || || | |||||||
Sbjct 87426 AGGACCAAGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGTCCATCT 87367
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || || ||||| || | || ||||| || || | || ||||| ||
Sbjct 87366 TCCAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCA 87307
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || |||||||||||| | || ||||| || ||||| |||
Sbjct 87306 TGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 87247
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | ||||| || || | ||||||
Sbjct 87246 TTACCGGTCAAGGTCTTCACGAAGATCTGCAT 87215
Score = 131 bits (144), Expect = 4e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || |||||||| || |||||||| || || | || || | || |||
Sbjct 86742 AGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCGTCT 86683
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || || ||||| | | || ||||| || || | || ||||||||
Sbjct 86682 TCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCT 86623
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || |||||||||||| | || ||||| || ||||| |||
Sbjct 86622 TGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 86563
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | ||||| || || | ||||||
Sbjct 86562 TTACCGGTCAAGGTCTTCACGAAGATCTGCAT 86531
Score = 131 bits (144), Expect = 4e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || |||||||| || |||||||| || || | || || | || |||
Sbjct 86970 AGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCGTCT 86911
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || || ||||| | | || ||||| || || | || ||||||||
Sbjct 86910 TCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCT 86851
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || |||||||||||| | || ||||| || ||||| |||
Sbjct 86850 TGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 86791
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | ||||| || || | ||||||
Sbjct 86790 TTACCGGTCAAGGTCTTCACGAAGATCTGCAT 86759
Score = 131 bits (144), Expect = 4e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || ||||||||||| |||||||| || || | || || | || |||
Sbjct 87198 AGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCGTCT 87139
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||| || || || ||||| | | || ||||| || || | || ||||||||
Sbjct 87138 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCT 87079
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || |||||||||||| | || ||||| || ||||| |||
Sbjct 87078 TGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 87019
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | ||||| || || | ||||||
Sbjct 87018 TTACCGGTCAAGGTCTTCACGAAGATCTGCAT 86987
Score = 127 bits (140), Expect = 5e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || ||||||||||| |||||||| || || | || || | || |||
Sbjct 86514 AGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCGTCT 86455
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||| || || || ||||| | | || ||||| || || | || || || ||
Sbjct 86454 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCTTTTTCT 86395
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| |||||||||||| | || ||||| || ||||| |||
Sbjct 86394 TGGATCTTCCCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 86335
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
|| || || | || ||||| || | |||||||
Sbjct 86334 TTACCGGTCAACGTTTTTACGAAGATCTGCATT 86302
>seq66
Length=542294
Score = 122 bits (134), Expect = 2e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | ||||| ||||||| || |||||||| || || || || |||||||
Sbjct 261610 AGGACCAAGTGAAAGGTGGACTTTTCCTGGATGTTGTAGTCAAACAGAGTGTGTCCATCT 261669
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| |||||| || || ||||| | | || ||||| || || | || ||||| ||
Sbjct 261670 TCCAACTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCT 261729
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || |||||||||||| | || ||||| || ||||| |||
Sbjct 261730 TGGATCTTGGCCTTGACATTGTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 261789
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || ||||| ||||| | ||||||
Sbjct 261790 TTACCGGTCAGGGTCTTCACAAAGATCTGCAT 261821
>seq11706
Length=58367
Score = 120 bits (132), Expect = 7e-22
Identities = 165/229 (72%), Gaps = 5/229 (2%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|| |||||| | | ||| |||| || ||||| ||||| ||||| || || | | ||
Sbjct 34770 ACAAAGTCTGAATATAAGATGAAAAGCAGACTCCTTTTGAATGTTGTAGTCAGACAAAGT 34711
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGT----TGGTCAGGAGGAA 211008
|||||||||||||| ||||| || ||||| || | | | || | ||||||||
Sbjct 34710 ATGTCCATCTTCCAGCTAATTGCCAGCAAAGATCAGTCAGTCTTCACTGTTTAGGAGGAA 34651
Query 211009 CTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCT 211068
||||||||| ||||| ||||| ||| || |||| | ||||| || ||||||||
Sbjct 34650 TTCCTTCCTTATCCTGAATCTTGGTTTTTAC-ATTTCTGTTGTGTCCAAGGGTTCAACCT 34592
Query 211069 CGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|||||||||| ||||| || || || || || | || | |||||| ||
Sbjct 34591 CGAGAGTGATGGTCTTCCCGGTAAGGGTTTTCATGAAAATCTGCATCTT 34543
>seq11308
Length=60846
Score = 105 bits (116), Expect = 2e-17
Identities = 108/139 (78%), Gaps = 3/139 (2%)
Strand=Plus/Minus
Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966
|||| |||||||||||||| ||||| ||||| || || | || | | ||||| |||||
Sbjct 52880 CAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCGGAAAAG-TATGTCCATTTTCCA 52822
Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC--TTCCTTGTCCTG 211024
|||||||||| || ||||| || | ||| || |||||||||| ||| || ||| | |||
Sbjct 52821 GCTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTTTTCTTATTCTG 52762
Query 211025 GATCTTTTGTTTCACGTTT 211043
|||||| ||||| |||
Sbjct 52761 GATCTTGACCTTCACATTT 52743
>seq8809
Length=77097
Score = 100 bits (110), Expect = 7e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|| |||||| | ||||| |||||||||||||| | || ||||| | || | ||
Sbjct 57514 ACAAAGTCTCAACACAAGATGAAGAGTGGACTCCTACTGAATGTTGCAGTCAGATGAAGT 57455
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| |||||||| |||||||| | | | ||||| || | ||| || ||| ||| || |||
Sbjct 57454 ACATCCATCTTGCAGCTGCTGGACAGGAAAGATTAGTCTTTGCTGATCAAGAGAAATTCC 57395
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||| | ||||||||| || || ||||| || || || || ||||| ||| |
Sbjct 57394 CTCCTTATGCTGGATCTTGGCCTTTACATTTTCTATTGTATCTAAGGGTTCAATCTCAAA 57335
Query 211073 AGTGATCGTCTTTCCCGT 211090
||| || ||||| || ||
Sbjct 57334 AGTAATGGTCTTCCCTGT 57317
>seq7041
Length=99228
Score = 96.9 bits (106), Expect = 8e-15
Identities = 151/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || ||||||| || || || | || || | || || | |||||
Sbjct 76594 AGCACCAAGTGCAGGGTGGACTTTTCCTGAATCCTGTAGTCTGAGAGAGTGCGGCCATCC 76535
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| | | | |||||||| || || || | || | |||||| || | |||||||||||
Sbjct 76534 TCTATCCGTTTGCCTGCAAAAATCAGACACTGCTAGTCAGGTGGGATGCCTTCCTTGTCT 76475
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCA--GAGCTTTCAACCTCGAGAGTGATCG 211080
||||| || ||| || || || |||||||| |||||| |||||| || || || |
Sbjct 76474 TGGATTTTAGATTTGACATTCTCAGTGGTGTCACTGAGCTT--AACCTCAAGGGTTATGG 76417
Query 211081 TCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||| || || || ||||| ||| | | ||||||
Sbjct 76416 TCTTGCCTGTCAGGGTCTTCACAGAGATCTGCAT 76383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1157774184117780
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